Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2 645 0.0 >seq2 Length=9042 Score = 645 bits (714), Expect = 0.0 Identities = 470/552 (85%), Gaps = 49/552 (9%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||| | ||||||| ||| |||||||||||||||||| Sbjct 2246 GTACTCATTCCAATTATAAGACCCATA-GAGCCCTATATTGTTATTTATTGTCACTACCT 2188 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2187 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2128 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA------------------ 162 |||||||||||||||||||||||||||||| |||||||||| Sbjct 2127 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTNNNNNTNNNNNNCNNNNTN 2068 Query 163 --------------------------CCCGTTGATACCATGGTAGGCCACTATCCTACCA 196 |||||||| ||||||||||||| ||||||||||| Sbjct 2067 NGNNNNNNNNCNNNNATNNNCNGTTNCCCGTTGAAACCATGGTAGGCCTCTATCCTACCA 2008 Query 197 TCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTC 256 |||||||||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||| Sbjct 2007 TCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGTCGGCGCAAGGCCATACGATTC 1948 Query 257 GTTAAGTTATTATGAATCACCAA-GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAA 315 | |||||||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct 1947 GAAAAGTTATTATGAATCACCAAGGGAGCGCTTTCACGCGTTGGTTTTTTATCTAATAAA 1888 Query 316 TACACCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAGAATTACCACGGTT 373 |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct 1887 TACACCCCTTCCAGAAGTCGGGGCTTTTAGGCATGTATTAGCTCTAGAATTACCACAGTT 1828 Query 374 ATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTT 433 |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 1827 ATCCATGTAGCAAGGTACCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAGTT 1768 Query 434 TCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 |||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1767 TCACAGTATGAATTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 1708 Query 493 GACTACTGGCAG 504 |||||||||||| Sbjct 1707 GACTACTGGCAG 1696 Score = 190 bits (210), Expect = 6e-46 Identities = 120/129 (93%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 377 CATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA 436 || |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1493 CANGTAGCAAGGTACCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCA 1434 Query 437 CTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495 | |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1433 CAGTATGAATTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 1374 Query 496 TACTGGCAG 504 ||||||||| Sbjct 1373 TACTGGCAG 1365 Score = 179 bits (198), Expect = 1e-42 Identities = 113/121 (93%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||| | ||||||| ||| |||||||||||||||||| Sbjct 2640 GTACTCATTCCAATTATAAGACCCATA-GAGCCCTATATTGTTATTTATTGTCACTACCT 2582 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2581 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGNT 2522 Query 121 T 121 | Sbjct 2521 T 2521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510394789120