Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq119 156 2e-36 seq99 156 2e-36 seq67 156 2e-36 seq31 156 2e-36 seq30 156 2e-36 >seq119 Length=122805 Score = 156 bits (172), Expect = 2e-36 Identities = 107/119 (90%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 107625 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCGC 107568 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 107567 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 107509 Score = 145 bits (160), Expect = 4e-33 Identities = 103/116 (89%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | || | Sbjct 97995 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCAC 97938 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || Sbjct 97937 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTT 97882 >seq99 Length=303622 Score = 156 bits (172), Expect = 2e-36 Identities = 107/119 (90%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 303386 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCGC 303443 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 303444 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 303502 >seq67 Length=5963 Score = 156 bits (172), Expect = 2e-36 Identities = 107/119 (90%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 1818 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCGC 1875 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 1876 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 1934 >seq31 Length=19280 Score = 156 bits (172), Expect = 2e-36 Identities = 107/119 (90%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 9384 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCGC 9327 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 9326 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 9268 Score = 156 bits (172), Expect = 2e-36 Identities = 107/119 (90%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 19036 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCGC 18979 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 18978 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 18920 >seq30 Length=19324 Score = 156 bits (172), Expect = 2e-36 Identities = 107/119 (90%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 2675 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCGC 2732 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 2733 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 2791 Score = 156 bits (172), Expect = 2e-36 Identities = 107/119 (90%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 ||||||||||||||||||||||||||||||||||||||| || |||| | | |||| Sbjct 12339 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGTTCGC 12396 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 12397 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 12455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399545860