Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq119 365 7e-99 seq99 365 7e-99 seq67 365 7e-99 seq31 365 7e-99 seq30 365 7e-99 >seq119 Length=122805 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 98379 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 98320 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 98319 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 98260 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 98259 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 98200 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 98199 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 98140 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 98139 AGAGCTATCAATCTGTC 98123 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108009 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 107950 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 107949 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 107890 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 107889 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 107830 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 107829 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 107770 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 107769 AGAGCTATCAATCTGTC 107753 >seq99 Length=303622 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303002 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 303061 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 303062 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 303121 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 303122 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 303181 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 303182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 303241 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 303242 AGAGCTATCAATCTGTC 303258 >seq67 Length=5963 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1434 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1493 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 1494 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 1553 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1554 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1613 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1614 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 1673 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 1674 AGAGCTATCAATCTGTC 1690 >seq31 Length=19280 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9768 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 9709 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 9708 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 9649 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 9648 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 9589 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 9588 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 9529 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 9528 AGAGCTATCAATCTGTC 9512 Score = 203 bits (224), Expect = 5e-50 Identities = 115/117 (98%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19280 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 19221 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 19220 ACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAAAGAGCTATCAATCTGTC 19164 Score = 170 bits (188), Expect = 3e-40 Identities = 112/124 (90%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 81 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 80 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 21 Query 122 ACCA 125 |||| Sbjct 20 ACCA 17 >seq30 Length=19324 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2291 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2350 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 2351 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 2410 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 2411 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 2470 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 2471 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 2530 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 2531 AGAGCTATCAATCTGTC 2547 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11955 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 12014 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 12015 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 12074 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 12075 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 12134 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 12135 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 12194 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 12195 AGAGCTATCAATCTGTC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798656894