Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq119 226 3e-57 seq67 226 3e-57 seq31 226 3e-57 seq30 226 3e-57 seq14 226 3e-57 >seq119 Length=122805 Score = 226 bits (250), Expect = 3e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 107370 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 107311 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 107310 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 107251 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 107250 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 107191 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 107190 ATACCGTGAGGCAGACC 107174 Score = 223 bits (246), Expect = 4e-56 Identities = 169/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 90327 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 90268 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 90267 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 90208 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 90207 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 90148 Query 179 TCGCCGTGAGGCGGACC 195 | ||||||| |||| Sbjct 90147 ATACTGTGAGGCAGACC 90131 >seq67 Length=5963 Score = 226 bits (250), Expect = 3e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 2073 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 2132 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2133 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 2192 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 2193 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 2252 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 2253 ATACCGTGAGGCAGACC 2269 >seq31 Length=19280 Score = 226 bits (250), Expect = 3e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 9129 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 9070 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9069 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 9010 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 9009 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 8950 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 8949 ATACCGTGAGGCAGACC 8933 Score = 226 bits (250), Expect = 3e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 18781 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 18722 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18721 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 18662 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 18661 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 18602 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 18601 ATACCGTGAGGCAGACC 18585 >seq30 Length=19324 Score = 226 bits (250), Expect = 3e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 2930 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 2989 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2990 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 3049 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 3050 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 3109 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 3110 ATACCGTGAGGCAGACC 3126 Score = 226 bits (250), Expect = 3e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 12594 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 12653 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12654 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 12713 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 12714 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 12773 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 12774 ATACCGTGAGGCAGACC 12790 >seq14 Length=29122 Score = 226 bits (250), Expect = 3e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 21614 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 21555 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21554 ATTCGGGCATAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 21495 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 21494 CAACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 21435 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 21434 ATACCGTGAGGCAGACC 21418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198996716