Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq119 466 3e-129 seq99 466 3e-129 seq67 466 3e-129 seq31 466 3e-129 seq30 466 3e-129 >seq119 Length=122805 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 98214 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 98273 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 98274 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 98333 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 98334 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 98393 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 98394 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 98453 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 98454 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 98513 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 98514 GCCCTTTGTA 98523 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 107844 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 107903 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 107904 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 107963 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 107964 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 108023 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 108024 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 108083 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 108084 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 108143 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 108144 GCCCTTTGTA 108153 >seq99 Length=303622 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 303167 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 303108 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 303107 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 303048 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 303047 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 302988 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 302987 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 302928 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 302927 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 302868 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 302867 GCCCTTTGTA 302858 >seq67 Length=5963 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 1599 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 1540 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 1539 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1480 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 1479 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 1420 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1419 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 1360 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 1359 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 1300 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 1299 GCCCTTTGTA 1290 >seq31 Length=19280 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 9603 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 9662 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 9663 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 9722 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 9723 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 9782 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 9783 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 9842 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 9843 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 9902 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 9903 GCCCTTTGTA 9912 Score = 423 bits (468), Expect = 4e-116 Identities = 265/284 (93%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 46 CCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGG 104 ||||||| ||||| || |||||||||||||||||||||||| || || || ||| || || Sbjct 1 CCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAGAGGGACTGTCTGCGTCTAGCAGACGG 60 Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 120 Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 |||||||||||||| |||||| | ||||||||||||||||||||||||||||| |||| Sbjct 121 CACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCCGGAAGGTCTGGGTAATCTTGTGAAAC 180 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 181 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATACCTAGTAA 240 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| | ||||||||| |||||||||||||||||||||||||||| Sbjct 241 GCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 284 >seq30 Length=19324 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 2456 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 2397 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 2396 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2337 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 2336 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 2277 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2276 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 2217 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 2216 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 2157 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 2156 GCCCTTTGTA 2147 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 12120 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 12061 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 12060 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 12001 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 12000 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 11941 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 11940 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 11881 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 11880 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 11821 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 11820 GCCCTTTGTA 11811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198351872