Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq119 138 2e-30 seq99 138 2e-30 seq51 138 2e-30 seq31 138 2e-30 seq30 138 2e-30 >seq119 Length=122805 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 102280 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 102337 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 102338 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 102397 Query 121 GAA 123 ||| Sbjct 102398 GAA 102400 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 120015 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 120072 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 120073 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 120132 Query 121 GAA 123 ||| Sbjct 120133 GAA 120135 >seq99 Length=303622 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 299100 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 299043 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 299042 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 298983 Query 121 GAA 123 ||| Sbjct 298982 GAA 298980 >seq51 Length=11645 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 11239 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 11296 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 11297 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 11356 Query 121 GAA 123 ||| Sbjct 11357 GAA 11359 >seq31 Length=19280 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 4041 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 4098 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 4099 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 4158 Query 121 GAA 123 ||| Sbjct 4159 GAA 4161 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 13669 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 13726 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 13727 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 13786 Query 121 GAA 123 ||| Sbjct 13787 GAA 13789 >seq30 Length=19324 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 8053 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 7996 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 7995 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 7936 Query 121 GAA 123 ||| Sbjct 7935 GAA 7933 Score = 138 bits (152), Expect = 2e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 17714 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 17657 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 17656 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 17597 Query 121 GAA 123 ||| Sbjct 17596 GAA 17594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198619136