Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phanerochaete_20chrysosporium_20[genbank_20GCA_5F001910725.1_202016- 12-20] 174 sequences; 39,205,125 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq173 100 1e-15 seq1 100 1e-15 seq103 91.5 6e-13 seq144 87.8 7e-12 >seq173 Length=34818 Score = 100 bits (110), Expect = 1e-15 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 349069 CGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGAC 349128 || ||||| || ||||||||||| | |||| || || || |||||| ||| |||||| Sbjct 16111 CGCGGCGTTGATAATCTCCTTGATACGTGGCACACCGAGCGTGACGTTCATGGACGCGAC 16170 Query 349129 GCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCC 349188 || ||||| ||||| |||| ||| |||| ||| ||| |||||| |||||| ||||| | Sbjct 16171 ACCAGCAAAATGGAAAGTCTTGAGCGTCATCTGGGTGCCGGGCTCACCGATGGACTGGGC 16230 Query 349189 CGCGAGGATGCCTACCATCTCGCCGGGC 349216 ||| | ||| || || ||||||| Sbjct 16231 ACCGACGGCGCCAACAGTCGAGCCGGGC 16258 >seq1 Length=2640167 Score = 100 bits (110), Expect = 1e-15 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 349069 CGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGAC 349128 || ||||| || ||||||||||| | |||| || || || |||||| ||| |||||| Sbjct 2626474 CGCGGCGTTGATAATCTCCTTGATACGTGGCACACCGAGCGTGACGTTCATGGACGCGAC 2626533 Query 349129 GCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCC 349188 || ||||| ||||| |||| ||| |||| ||| ||| |||||| |||||| ||||| | Sbjct 2626534 ACCAGCAAAATGGAAAGTCTTGAGCGTCATCTGGGTGCCGGGCTCACCGATGGACTGGGC 2626593 Query 349189 CGCGAGGATGCCTACCATCTCGCCGGGC 349216 ||| | ||| || || ||||||| Sbjct 2626594 ACCGACGGCGCCAACAGTCGAGCCGGGC 2626621 >seq103 Length=268601 Score = 91.5 bits (100), Expect = 6e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || ||||||||||| | |||| || || || |||||| ||| |||||| || Sbjct 45539 GGCGTTGATAATCTCCTTGATACGTGGCACACCGAGCGTGACGTTCATGGACGCGACACC 45480 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||| |||| ||| |||| ||| || |||||| ||||| ||||| Sbjct 45479 AGCAAAGTGGAAAGTCTTGAGCGTCATCTGGGTACCGGGCTCACCGATAGACTGG 45425 >seq144 Length=56295 Score = 87.8 bits (96), Expect = 7e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 349069 CGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGAC 349128 || ||||| || ||||||||| | | |||| || || || |||||| ||| |||||| Sbjct 40887 CGCGGCGTTGATAATCTCCTTAATACGTGGCACACCGAGCGTGACGTTCATGGACGCGAC 40828 Query 349129 GCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 || ||||||||||| |||| ||| |||| ||| || |||||| ||||| ||||| Sbjct 40827 ACCAGCAAAGTGGAAAGTCTTGAGCGTCATCTGGGTACCGGGCTCACCGATAGACTGG 40770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084734438976852