Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq552 387 3e-105 >seq552 Length=11202 Score = 387 bits (428), Expect = 3e-105 Identities = 275/313 (88%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| ||| |||||||||| |||||| Sbjct 3909 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTTACTGGGTGTGTCGGGGAA 3850 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||| | ||| |||||||||| Sbjct 3849 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCTTATGCCCGAATACATT 3790 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3789 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 3730 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | ||||||| ||| |||||||||||||||||| Sbjct 3729 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTGGA 3670 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| |||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 3669 TTTACGGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 3611 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 3610 CGAAGGTTAGGGG 3598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915172370112