Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq106 230 3e-58 seq8 230 3e-58 seq66 210 3e-52 >seq106 Length=109336 Score = 230 bits (254), Expect = 3e-58 Identities = 171/198 (86%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 81173 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 81114 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 81113 ATTCAGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 81054 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| ||| | | ||||| Sbjct 81053 CAACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGGCCCAGCCAGACAGTA 80994 Query 178 CTCGCCGTGAGGCGGACC 195 |||||||| | ||||||| Sbjct 80993 CTCGCCGTTAAGCGGACC 80976 Score = 230 bits (254), Expect = 3e-58 Identities = 171/198 (86%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 82790 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 82849 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 82850 ATTCAGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 82909 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| ||| | | ||||| Sbjct 82910 CAACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGGCCCAGCCAGACAGTA 82969 Query 178 CTCGCCGTGAGGCGGACC 195 |||||||| | ||||||| Sbjct 82970 CTCGCCGTTAAGCGGACC 82987 Score = 230 bits (254), Expect = 3e-58 Identities = 171/198 (86%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 93339 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 93398 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 93399 ATTCAGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 93458 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| ||| | | ||||| Sbjct 93459 CAACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGGCCCAGCCAGACAGTA 93518 Query 178 CTCGCCGTGAGGCGGACC 195 |||||||| | ||||||| Sbjct 93519 CTCGCCGTTAAGCGGACC 93536 >seq8 Length=1233415 Score = 230 bits (254), Expect = 3e-58 Identities = 171/198 (86%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 13739 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 13798 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13799 ATTCAGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 13858 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||||||| ||| | | ||||| Sbjct 13859 CAACGCACACCAATAAAGGGCACGCCGGCTCACCAAGAGGTAAGGCCCAGCCAGACAGTA 13918 Query 178 CTCGCCGTGAGGCGGACC 195 |||||||| | ||||||| Sbjct 13919 CTCGCCGTTAAGCGGACC 13936 >seq66 Length=385752 Score = 210 bits (232), Expect = 3e-52 Identities = 169/198 (85%), Gaps = 7/198 (4%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| |||||||||||||| | |||||||||||||||| Sbjct 53938 CGACTCTAGAAACCAACAAAATAGA-ACGCACGTCCTATTTT--TATTCCATGCTAATGT 53882 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53881 ATTCAGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 53822 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||||||| || |||| | |||||||||||| ||| ||| | | ||||| Sbjct 53821 CAACGCACACCAATAAAGGGCACGCCGGCTCACCAAGA-GTAAGGCCCAGCCAGACAGTA 53763 Query 178 CTCGCCGTGAGGCGGACC 195 |||||||| | ||||||| Sbjct 53762 CTCGCCGTTAAGCGGACC 53745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199042844