Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq18696 356 8e-96 >seq18696 Length=3297 Score = 356 bits (394), Expect = 8e-96 Identities = 413/544 (76%), Gaps = 22/544 (4%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTG-GGCCCCCTAGACCATCCAGTG 109 ||| ||||| |||||| | || || ||||||| | |||||||||| | | ||||| Sbjct 1066 CGGTATTCGTAGTTTGCATCGAGTT-GGTAAGCCGGGATGGCCCCCTAGTCGAAACAGTG 1008 Query 110 CTCTACCTCCGG-GAAGAAA-CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167 ||||||| ||| || || |||| | |||| |||||||| ||||||||||||||| Sbjct 1007 CTCTACCCCCGAAGATGAGTTCACGAGGCGCT--ACCTAAATAGCTTTCGGGGAGAACCA 950 Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227 |||||| | ||||||||||||||||||||| | ||||| ||||||| || | |||||| Sbjct 949 GCTATCTCCCGGTTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAATTTTTCA 890 Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 || | ||| |||||||||||||| || |||||| ||||||||||||||||| ||| Sbjct 889 ACATTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATGGCTAG 830 Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347 ||||| | ||||||||| | | ||| ||| |||||| || |||||| |||| | Sbjct 829 ATCACCGGGTTTCGGGTCTATACCTTGCAACT-TGACGCCCAGTTAAGACTCGGTTTCCC 771 Query 348 TACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTC 407 ||||||| ||| | | ||||||||| || ||| || || |||| | | |||| | | Sbjct 770 TACGGCTCCCCTATTC-GGTTAACCTTGCTACA-AAATATAAGTCGCTGACCCATTATAC 713 Query 408 AAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCAC 467 |||||| |||| ||| |||||| || | ||||| || | ||||| | || Sbjct 712 AAAAGGTACGCAGTC-------ACCTAA----CAAGTAGGCTCCCACTGCTTGTACGTAC 664 Query 468 ATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGT 526 | |||||||||| |||||||||||||| | | ||||| |||||| ||||||||||||||| Sbjct 663 ACGGTTTCAGGTTCTATTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 604 Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 ||| || | |||||||||| |||||||||||| ||| || ||||||| ||| |||| Sbjct 603 ACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTC 544 Query 587 ACAC 590 | || Sbjct 543 AGAC 540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817110447616