Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq121 289 4e-76 seq107 289 4e-76 seq23 289 4e-76 seq9 289 4e-76 >seq121 Length=59016 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 9516 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 9459 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 9458 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 9399 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 9398 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 9339 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9338 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 9288 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 20111 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 20054 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 20053 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 19994 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 19993 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 19934 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19933 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 19883 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 30706 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 30649 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 30648 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 30589 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 30588 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 30529 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30528 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 30478 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 41301 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 41244 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 41243 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 41184 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 41183 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 41124 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41123 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 41073 Score = 253 bits (280), Expect = 3e-65 Identities = 197/227 (87%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 51899 GTACAAAGG-CAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 51843 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 51842 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 51783 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAA--TACATCAGTGTAGCGCGCGTG 177 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||| Sbjct 51782 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGGCCTCTGTCAGTGTAGCGCGCGTG 51723 Query 178 CGGCCCAGAACATCTAAGGGC-ATCACAGACCTGTTATTGCCTCAAA 223 ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 51722 CGGCCCAGAACATCTAAGGGCAATCACAGACCTGTTATTGCCTCAAA 51676 >seq107 Length=115444 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 106082 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 106025 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 106024 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 105965 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 105964 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 105905 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105904 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 105854 >seq23 Length=28408 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 6665 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 6608 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 6607 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 6548 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 6547 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 6488 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6487 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 6437 >seq9 Length=31834 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 6120 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 6063 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 6062 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 6003 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 6002 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 5943 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5942 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 5892 Score = 289 bits (320), Expect = 4e-76 Identities = 205/231 (89%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 24499 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 24442 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 24441 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 24382 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 24381 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 24322 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24321 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 24271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998994670