Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq121 161 6e-38 seq107 161 6e-38 seq23 161 6e-38 seq9 161 6e-38 >seq121 Length=59016 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 8988 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 8929 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 8928 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 8872 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 19582 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 19523 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 19522 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 19466 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 30177 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 30118 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 30117 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 30061 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 40772 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 40713 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 40712 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 40656 Score = 147 bits (162), Expect = 1e-33 Identities = 102/115 (89%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64 ||||||||||||||||||||||||||||||||||| || || | | ||||||||||| Sbjct 51360 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCCGATC 51301 Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACG--GTATCTGATCGTCTTCGA 117 ||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| Sbjct 51300 CCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTGTATCTGATCGTTTTCGA 51246 >seq107 Length=115444 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 105553 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 105494 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 105493 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 105437 >seq23 Length=28408 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 6137 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 6078 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 6077 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 6021 >seq9 Length=31834 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 5592 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 5533 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 5532 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 5476 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 23970 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 23911 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 23910 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 23854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399639820