Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq121 217 2e-54 seq107 217 2e-54 seq23 217 2e-54 seq9 217 2e-54 >seq121 Length=59016 Score = 217 bits (240), Expect = 2e-54 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 8735 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 8676 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8675 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 8616 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 8615 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 8556 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 8555 ATACCGTGAGGCAGACC 8539 Score = 217 bits (240), Expect = 2e-54 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 19327 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 19268 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19267 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 19208 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 19207 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 19148 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 19147 ATACCGTGAGGCAGACC 19131 Score = 217 bits (240), Expect = 2e-54 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 29922 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 29863 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29862 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 29803 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 29802 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 29743 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 29742 ATACCGTGAGGCAGACC 29726 Score = 217 bits (240), Expect = 2e-54 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 40517 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 40458 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 40457 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 40398 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 40397 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 40338 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 40337 ATACCGTGAGGCAGACC 40321 Score = 192 bits (212), Expect = 7e-47 Identities = 138/156 (88%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 51107 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 51048 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 51047 ATTCGGGCATAGGCCTGCTTTG-ACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 50989 Query 121 CCGCACACCAATGAA---GGCATACGGGCTCACCAA 153 | ||||||| ||| ||||| | |||||||||| Sbjct 50988 CGACACACCA--GAAAGGGGCATGCCGGCTCACCAA 50955 >seq107 Length=115444 Score = 217 bits (240), Expect = 2e-54 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 105298 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 105239 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105238 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 105179 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 105178 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 105119 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 105118 ATACCGTGAGGCAGACC 105102 >seq23 Length=28408 Score = 217 bits (240), Expect = 2e-54 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 5882 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 5823 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5822 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 5763 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 5762 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 5703 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 5702 ATACCGTGAGGCAGACC 5686 >seq9 Length=31834 Score = 217 bits (240), Expect = 2e-54 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 5337 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 5278 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5277 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 5218 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 5217 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 5158 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 5157 ATACCGTGAGGCAGACC 5141 Score = 214 bits (236), Expect = 2e-53 Identities = 167/197 (85%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 23716 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 23657 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23656 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC- 23598 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 23597 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 23538 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 23537 ATACCGTGAGGCAGACC 23521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199204292