Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20]
9,793 sequences; 21,322,328 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq156 430 4e-118
seq199 289 9e-76
seq323 91.5 5e-16
seq306 91.5 5e-16
>seq156
Length=1468
Score = 430 bits (476), Expect = 4e-118
Identities = 243/246 (99%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1468 AGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 1409
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1408 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 1349
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 1289
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1288 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCAC 1229
Query 538 TTTCTG 543
||||||
Sbjct 1228 TTTCTG 1223
>seq199
Length=985
Score = 289 bits (320), Expect = 9e-76
Identities = 240/291 (82%), Gaps = 4/291 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 758
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 759 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCAATTCGGATC 818
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
| || | |||| ||| || ||| || || |||| ||||||||||||
Sbjct 819 -AAGCATAAATGCTTTTAAGTCCAAAAGGTGGGTCGTTAAACCCAGCTCCGCTTCATTGG 877
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||| | ||||| |||||||||||||||| |||||||| |||||||||||
Sbjct 878 ATAAGTAAAGAGACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 934
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||| || ||| ||||||| ||| ||||||||||||||||||
Sbjct 935 TTCTACACCCTCCATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAAC 985
>seq323
Length=570
Score = 91.5 bits (100), Expect = 5e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 55 AGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 1
>seq306
Length=583
Score = 91.5 bits (100), Expect = 5e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 55 AGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635039864864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |