Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq33 356 2e-93 seq62 226 2e-54 >seq33 Length=192376 Score = 356 bits (394), Expect = 2e-93 Identities = 1225/1880 (65%), Gaps = 64/1880 (3%) Strand=Plus/Plus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 |||||||||||||| || | || | |||||| | || |||||| ||||||||||||| Sbjct 132770 GTGAACTGGATCGCGTTGGAGGCAGGCTTGGTACGCAGGTAGTACGTGCCGGTCTTGAGA 132829 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACA 65203 || ||| | || || |||||||| | | | | | | ||| | | | Sbjct 132830 CCCTTCTTCCAGCCGTAAAAGTGCATCGAGGTGAGCTGACCGAACGTGGGCGCCGAGAGG 132889 Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATG 65263 || || || | |||||| ||| |||| || |||||| || ||||||||||| ||| Sbjct 132890 TGGATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCAGCCATGTCGATG 132949 Query 65264 ATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGA-A 65321 || | | || | | ||||||||||| ||||||||||| | | | | | || | Sbjct 132950 ATG-GCCTTCTGGCTGATCTCCCAGACAGTCTTGTACAG-CTTCTTGATGCGGTCGGGGA 133007 Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTG 65381 | | | || ||||| ||||| | | || || ||||| || ||||| || Sbjct 133008 TGCCGGGCACGTTCTGGATGGAACCGCCGTGGGCGATGATGCGGTTCTTCATCGTGTCGT 133067 Query 65382 ACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGC 65441 ||||| |||| |||| || | ||| ||| | |||| || ||||| || | Sbjct 133068 TCCACAGACCCTGCTCGACGAGCTCGCGAAGCAACCAGGGGTTGACCACCTGGAATTCAC 133127 Query 65442 CGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGC 65501 ||| || |||||||| ||||||||||||||| || || ||| | || || || Sbjct 133128 CGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGAAGC 133187 Query 65502 CTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATC 65561 | || || || || || || || |||||||| || | || || ||||| || | | Sbjct 133188 CGAGGATCTGACTGGTCGAAGCGGTAGGCATGGGCGCCAACAGCAGCGAGTTGCGGAGAC 133247 Query 65562 CGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCG 65617 ||| | | | || ||| ||| || || |||||| ||||| ||| | || Sbjct 133248 CGTGCTTAGCGATCTTGGTCTTGA-GC---TCAGCCCAGTCCCACA--GGTCGGAAGGCG 133301 Query 65618 ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAA 65677 | || |||||| || | ||||| || ||| || || || | | Sbjct 133302 TGA----CGCCCCACATGTCGTACTGCAGCTCGCCCTGCGAGGCGGGCGAGCCTGCGTAG 133357 Query 65678 CTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGGCAAAATA 65736 | ||||| || | ||||| ||| || | || | | | |||||| ||||| || Sbjct 133358 GTCTCGTAGGTGCCGTGCTCCTGGGCCAGCTCGCACGATCG-CTCGAGGGCGGCGTGGTA 133416 Query 65737 AATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCAT-CGCTCTCGTACGGCATA- 65794 ||||||||||| || | || || || ||||| || | ||| | ||| || Sbjct 133417 GATGGTCTCGAAGATCTGCACGTTGAGACGGCGAGCCTCGGGCGAT-TCGAA-GGCGTAG 133474 Query 65795 CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 ||||| | | || | |||||| ||||| || || || || ||||| || ||||| ||| Sbjct 133475 CCCATGATCATGAAGGCGTCGGCGAGACCCTGGACACCGATGCCGATAGGGCGATGGCGC 133534 Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914 | ||||| | | ||||| || |||||||| ||||| ||||| || || | Sbjct 133535 ATGTTGGACCTGCGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTGAGG 133594 Query 65915 TTGCGTGTCACCACATGCAC-----GATACGTCGCAATTGTTCGAAATCAAAATGTTTAG 65969 || | || || ||| | || || | | | | ||| || | Sbjct 133595 TT-CTTG----CAGATGGCCTTGGCGACACTGTGGAGGCGCTTGAAGTCGTA-------- 133641 Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029 || | | ||| ||| | | || |||||||||||| || || |||||||||| Sbjct 133642 ---GACCTTG-GTGACGGGGTCGATGAAGGTGGGAAGGGCAATGGAGGCAAGGTTGCAGA 133697 Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089 | || | |||||| |||||| | ||||||| || ||||||||||| || ||| | Sbjct 133698 CGGCGACCTCGTCGGGAGCGCTGTACTCGATGATCTCGGTGCACAGGTTGGAGCACTTGA 133757 Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149 | ||||| | |||| || || ||||| || ||| || |||||||| | ||| | | Sbjct 133758 TAGTGCCGAGGTTCTTCTGGTTGCTCTTTCGGTTGGCAGCGTCCTTGTAGAGGATGAAGG 133817 Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCG 66209 | |||||||||| || ||||| | |||||||| ||| || | ||||| || | Sbjct 133818 GGTTGCCGGTCTCTGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGCGCCTTGACGG 133877 Query 66210 TACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCC 66269 | || | | ||| | | ||||| | ||||||||| | ||||| || || Sbjct 133878 TGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCGAACTCGTCGCCGT 133937 Query 66270 ATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTT 66329 | |||| |||| || |||| || || ||||| |||||||| || || | ||| | Sbjct 133938 AGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCT 133997 Query 66330 CTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTT 66389 | || | ||| || ||||| || | |||||| ||||||||||| || || || || Sbjct 133998 CGACCCTCTTCATGAAGAGATCGGGCACCCAGAGCGCGTAGAAGAGCTCACGAGCACGCA 134057 Query 66390 GCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 ||| || | ||||| || ||||| | ||| |||||||| || | ||| | ||||||| Sbjct 134058 CCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAACACGTCCGAGTGCCATG 134117 Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509 | || | |||||||||||| | || || ||| |||||| ||||| |||||||| | Sbjct 134118 GCTCGATGTAGATGGCGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGCG 134177 Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGT 66569 | ||||||||||| || | ||| || |||| || || || ||||||||| Sbjct 134178 CAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCATTGCTGACACCGTTGGTGCCGG 134237 Query 66570 CGATGGGGGATCCTCGTGCC-CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 | ||| |||||| || || || || ||| | || || || ||||||||||| ||| Sbjct 134238 CAATGTAGGATCC-GGTACCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTC 134296 Query 66629 TTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || ||||| ||||| || | | || | | |||||||| || ||||| ||| Sbjct 134297 TTGGAGATCATGGCACA--CGTCTTGAGCGTGTCGTAGATGCCGTCGATCGAGTCGTCCT 134354 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTG-GGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745 | ||||| | ||| |||| || || || |||| |||| || | || ||||||| Sbjct 134355 TCATGGTGACAAGGAAGCACGACGAGAGCTGCGGGTGTGGG-GTACCAGCGTTGAAGAGG 134413 Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCA 66805 ||||| | ||||| || ||||| | | |||||| ||||||||||||||| | Sbjct 134414 GTGGGCGAGGCGTGGGTGAAGTACTTTTGCGACATGAGGTTGTACGTCTCGATGGCGCTC 134473 Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCG--- 66861 || |||| | ||| || || |||| || ||| ||||| || | || || || || Sbjct 134474 TCGATGTCCTGGCCGTGGATTCCGACGGCGACA-CGCATGAGCATGTGCTGGGGACGCTC 134532 Query 66862 TTCGACC-AGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 | ||||| |||| ||||| | | | |||||| || || |||||||||| || | Sbjct 134533 TGCGACCTTGCCG----TTGATGCGGAGGAGGTAGGAACGCTCGAGGGTCTTGAAGCCGA 134588 Query 66921 AGTACGAGTAATTGAAATCG 66940 || | ||| | ||| ||| Sbjct 134589 AGAAGTTGTAGTGGAAGTCG 134608 >seq62 Length=98030 Score = 226 bits (250), Expect = 2e-54 Identities = 381/541 (70%), Gaps = 13/541 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| |||| | Sbjct 37700 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTT 37641 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||||| | | | ||| | || | || ||||| Sbjct 37640 TCCAAGGACCTCCACGACTGGGACAACAAGCTCAACGA-CAACGAGCGCCACTTCATCTC 37582 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| |||||||| ||||| |||||||| ||||| | | || || Sbjct 37581 CCACGTTCTCGCCTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTCGAGCG 37522 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||| || || | | ||||| ||||| ||||||||||||||||| | Sbjct 37521 ATTCAGCTC-GGAAGTTCAGGCCGCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGA 37463 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||| | ||| | |||||||| || |||||| | || | | Sbjct 37462 TGGAGAACATCCACTCGGAAACCTACTCGCTCCTCATCGACACCTACATCCGCGAACCAG 37403 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || ||| | || | ||| ||||||| || || | || |||| ||| || | Sbjct 37402 AGCAGCGCGAATTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAGGCCG 37343 Query 61442 ATTGGGC-CTTCAATTGGATCACCAGTACAA-CG-GCTACATTTGGTGAACGATTGCTGG 61498 | ||||| |||| | ||||||| | |||| || || || |||| || || | | | Sbjct 37342 ACTGGGCTCTTCGA-TGGATCAGC--GACAAGCGCGCCACCTTTGCAGAGCGTCTCATCG 37286 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | ||||| | |||||||| | || ||| ||| || || ||| | ||||| ||| | | Sbjct 37285 CCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCTGGCTCA 37226 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| ||||| || ||||||||||| |||||| ||| ||| | || || || ||||||| Sbjct 37225 AGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGG 37166 Query 61619 G 61619 | Sbjct 37165 G 37165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397520549389520