Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 6e-13 >seq4 Length=378594 Score = 87.8 bits (96), Expect = 6e-13 Identities = 165/242 (68%), Gaps = 18/242 (7%) Strand=Plus/Plus Query 1957 CTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTCTATC 2016 || || || ||| | ||||| || || || ||||||||||| || || ||||| || ||| Sbjct 105278 CTCGATGGCACTGCCAACAAGGGCAAGCTCGGTGCCAACGCCATCCTCGGTGTTTCCATC 105337 Query 2017 GCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTTACAGCTACCTTG----- 2071 ||||| || || | ||||| | | | || || || |||| ||||||| Sbjct 105338 GCTGTCGCCAAGGCTGGTGCTGGTGAGCAGGGTGTCCCCCTCTACAAGTACCTTGCTGAG 105397 Query 2072 ----GCGGATTCAA---CACTAAAGTTCTTCCAACTCCAATGATGAACATCATCAACGGT 2124 |||| |||| | || | ||||| || |||| |||||| ||||||||||| Sbjct 105398 CTCAGCGGTGTCAAGGCCCCTTACGTTCTCCCCGCTCCTGCCATGAACGTCATCAACGGT 105457 Query 2125 GGTTCTCACTCAG---ACGCTCCAATCGCTTTCCAAGAATTTATGATTGTACCTGCTGGT 2181 ||||| ||| | | |||||| | || ||||| || || ||||| || || ||||| Sbjct 105458 GGTTCGCACGCCGGTAACGCTC---TTGCCTTCCAGGAGTTCATGATCGTCCCCACTGGT 105514 Query 2182 GC 2183 || Sbjct 105515 GC 105516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156014608044960