Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq4 87.8 6e-13
>seq4
Length=378594
Score = 87.8 bits (96), Expect = 6e-13
Identities = 165/242 (68%), Gaps = 18/242 (7%)
Strand=Plus/Plus
Query 1957 CTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTCTATC 2016
|| || || ||| | ||||| || || || ||||||||||| || || ||||| || |||
Sbjct 105278 CTCGATGGCACTGCCAACAAGGGCAAGCTCGGTGCCAACGCCATCCTCGGTGTTTCCATC 105337
Query 2017 GCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTTACAGCTACCTTG----- 2071
||||| || || | ||||| | | | || || || |||| |||||||
Sbjct 105338 GCTGTCGCCAAGGCTGGTGCTGGTGAGCAGGGTGTCCCCCTCTACAAGTACCTTGCTGAG 105397
Query 2072 ----GCGGATTCAA---CACTAAAGTTCTTCCAACTCCAATGATGAACATCATCAACGGT 2124
|||| |||| | || | ||||| || |||| |||||| |||||||||||
Sbjct 105398 CTCAGCGGTGTCAAGGCCCCTTACGTTCTCCCCGCTCCTGCCATGAACGTCATCAACGGT 105457
Query 2125 GGTTCTCACTCAG---ACGCTCCAATCGCTTTCCAAGAATTTATGATTGTACCTGCTGGT 2181
||||| ||| | | |||||| | || ||||| || || ||||| || || |||||
Sbjct 105458 GGTTCGCACGCCGGTAACGCTC---TTGCCTTCCAGGAGTTCATGATCGTCCCCACTGGT 105514
Query 2182 GC 2183
||
Sbjct 105515 GC 105516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156014608044960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |