Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq956 482 4e-134 seq587 473 2e-131 seq600 304 2e-80 seq958 233 3e-59 seq957 228 1e-57 seq35765 210 4e-52 seq25846 158 2e-36 seq4411 132 9e-29 seq5714 109 1e-21 >seq956 Length=2258 Score = 482 bits (534), Expect = 4e-134 Identities = 300/318 (94%), Gaps = 3/318 (1%) Strand=Plus/Minus Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60 |||||| |||||||||||||| |||||||| || || ||||| |||||||||| ||| | Sbjct 2176 TACTTG-TCCGGCCGGGCCTT-CCTTCTGGAGAACCTCATGCTCTTCACTGGGCGTGTTG 2119 Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2118 GGGA-CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 2060 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2059 ACGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG 2000 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 1999 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 1940 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 1939 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 1880 Query 301 GTGAACGAAAGTTAGGGG 318 |||||||||||||||||| Sbjct 1879 GTGAACGAAAGTTAGGGG 1862 >seq587 Length=3399 Score = 473 bits (524), Expect = 2e-131 Identities = 294/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||| Sbjct 2051 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 1992 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 1991 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 1932 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1931 TAGCATGGAATAATGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 1872 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1871 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 1812 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 1811 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 1753 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 1752 ACGAAAGTTAGGGG 1739 >seq600 Length=4933 Score = 304 bits (336), Expect = 2e-80 Identities = 236/280 (84%), Gaps = 1/280 (0%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 4552 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 4493 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||||| | ||| ||||||||||||||||||||||| ||||||| ||| | |||| Sbjct 4492 CAAAGCAGGCTTATGCCTGAATACATTAGCATGGAATAATAAAATAGGATGTGTGATTCT 4433 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||||||||| |||||||||| ||||||| ||| ||||| | |||| Sbjct 4432 ATTTTGTTGGTTTCTAGGATTACCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 4373 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | || ||||||||||||||||||||||| || ||||| ||||||||||||||| | Sbjct 4372 TACATCGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTG 4313 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||| |||| ||||||| |||| ||| Sbjct 4312 CCAAGGATGACTTCATTGATCA-AGAACGAAGGTTAAGGG 4274 >seq958 Length=494 Score = 233 bits (258), Expect = 3e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 374 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 315 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 314 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 256 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 255 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 196 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 195 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 137 Query 311 GTTAGGGG 318 ||| |||| Sbjct 136 GTTGGGGG 129 >seq957 Length=323 Score = 228 bits (252), Expect = 1e-57 Identities = 142/150 (95%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCG-GGGGTGTCAGTATTCAATTGTCA 228 |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| Sbjct 323 TTCTAGGACCGCCGTAATGATTAATAGGGACAGTCGAGGGGCATCAGTATTCAATTGTCA 264 Query 229 GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGT 288 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 263 GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGT 204 Query 289 TTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| |||||||||||||||| Sbjct 203 TTTCATTAATCAG-GAACGAAAGTTAGGGG 175 >seq35765 Length=836 Score = 210 bits (232), Expect = 4e-52 Identities = 195/244 (80%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 78 CTTTGAAAAAATTAG--AGTG-TTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||| ||||||||| ||| || |||| |||||||| || ||||| |||| || ||| Sbjct 833 CTTTAAAAAAATTAAGTAGTTATTTAAAGTAGGCCTTTACTTAAATACGTTAGTATAGAA 774 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||||||||||||| | || ||||||| || ||||||||||| | ||||| |||||| Sbjct 773 TAATAGAATAGGATATATAGTCCTATTTTATTAGTTTCTAGGACTAC-GTAATAATTAAT 715 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||||||| ||||| | |||||| |||| | |||||| |||||||| |||||||| || Sbjct 714 AGGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTAAAATTCTTAGATTTATTAAA 655 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||| |||| || || |||||| |||| |||||| ||| || ||||||| Sbjct 654 GACTAACTACTATAAAAGTATTTACTAAGGATATTTTTATTAATTAGTAAATAAAAGTTA 595 Query 315 GGGG 318 |||| Sbjct 594 GGGG 591 >seq25846 Length=1083 Score = 158 bits (174), Expect = 2e-36 Identities = 112/122 (92%), Gaps = 5/122 (4%) Strand=Plus/Minus Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 232 GGGACAGTCGGGGCA-TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA-TTATTGAAG 175 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 |||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||| Sbjct 174 ACTAACTACTGCGAAAGCATT-GCCAAGGATG-TTTCATTAATCAGTG-ACGAAAGTTAG 118 Query 316 GG 317 || Sbjct 117 GG 116 >seq4411 Length=292 Score = 132 bits (146), Expect = 9e-29 Identities = 104/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 201 AGTCGGGGGTGTCAGTATTCAATTGT-CAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 ||| |||| | |||||| |||||| |||||||||| ||||||||||||| |||||||| Sbjct 289 AGTTGGGGCGATTAGTATTTAATTGTTCAGAGGTGAA-TTCTTGGATTTAT-GAAGACTA 232 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| |||||||||| || |||||||||||||||||||||| |||||||||||||||| Sbjct 231 ACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 174 >seq5714 Length=244 Score = 109 bits (120), Expect = 1e-21 Identities = 110/138 (80%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 |||||||||| |||||| ||| |||| | ||||| || |||||||||||||||| Sbjct 4 CCGTAATGAT-AATAGGTC-AGTTGGGGCATTT-GTATTACATCGTCAGAGGTGAAATTC 60 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| || ||||| ||||||||||||||| | ||||||||| |||||| |||| Sbjct 61 TTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTGCCAAGGATGACTTCATTGATCA 120 Query 301 GTGAACGAAAGTTAGGGG 318 ||||||| |||| ||| Sbjct 121 -AGAACGAAGGTTAAGGG 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914007494400