Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq79519 167 2e-39 seq93083 113 5e-23 >seq79519 Length=1017 Score = 167 bits (184), Expect = 2e-39 Identities = 128/149 (86%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 46 CTTCGTCATCTAAAAGATAACTCGTCATCAGCTCCCGGCCTTAGA-ATCCCGGATTTACC 104 |||| | ||||||||| ||||||||||||| ||||| |||| ||||||||||| Sbjct 859 CTTCTCCTTCTAAAAGAAGGATCGTCATCAGCTCTCGGCC-TAGACCGTCCGGATTTACC 917 Query 105 TAAGATTCCAGCCTACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCT 164 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 918 TAAACAGTCAGCCTACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCT 977 Query 165 CCGTCCCTCCATCGCATTAACCAGAAGTA 193 ||||||| |||||||| |||| ||||||| Sbjct 978 CCGTCCCCCCATCGCAGTAACTAGAAGTA 1006 >seq93083 Length=678 Score = 113 bits (124), Expect = 5e-23 Identities = 69/72 (96%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 122 ACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCAT 181 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 486 ACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCC-CCATCGCAG 544 Query 182 TAACCAGAAGTA 193 |||| ||||||| Sbjct 545 TAACTAGAAGTA 556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517745633400