Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq52867 89.7 5e-16 seq32551 86.0 7e-15 seq3864 84.2 2e-14 >seq52867 Length=861 Score = 89.7 bits (98), Expect = 5e-16 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| |||| || | ||| ||| |||||||||||||| ||| ||| || Sbjct 623 CGCAAACCGACACAGGTAGGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCA-GGAG 681 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||| |||||| ||| | |||||||||||| || Sbjct 682 AAGGAACTCGGCAAATTGATACCGTAACTTCGGGAGAA 719 >seq32551 Length=639 Score = 86.0 bits (94), Expect = 7e-15 Identities = 128/179 (72%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||| ||| || ||||| |||||||||||| ||| | | | |||| Sbjct 461 AAACCGACACAGGTGGTCAGGTAGAGTATACCAAGGCGCTTGAGAGAACTATGTTGAAGG 520 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGG-GTCCCTA---CCCAGAAATGGG 140 |||| |||||| || | |||||||||| | || | | |||| | | || || | Sbjct 521 AACTCGGCAAATTGCACGCGTAACTTCGGAAGAAGCGTGACCCTTTTGCACGCAAGTGTG 580 Query 141 AGGGCG---CAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || | || ||| ||| || |||||||| ||||||||||||||| ||| || Sbjct 581 ATGGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATCAAAAACACAGGGCTCTGCGAA 639 >seq3864 Length=859 Score = 84.2 bits (92), Expect = 2e-14 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| ||| || || ||| ||| || |||| ||||| ||||||||| |||||||| Sbjct 234 AAACCGACTCAGGTGGTCAGGTAGAGAATACCGAGGCGTGCGAGTGAATCGTGGTTAAGG 175 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCC 125 |||| |||||| || ||| |||||||||||| || ||| || Sbjct 174 AACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGGGCC 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530529476200