Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq463 131 4e-28 seq3864 125 2e-26 seq52867 91.5 4e-16 seq14038 91.5 4e-16 seq32551 86.0 2e-14 seq17964 84.2 6e-14 seq36348 77.0 8e-12 >seq463 Length=10439 Score = 131 bits (144), Expect = 4e-28 Identities = 194/271 (72%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||| ||| || ||| ||||||||||| ||| | |||||||| |||||||| Sbjct 5111 ATCTGCACTGCTATTCCAATTTCACTGGGTCAATCATAGAGACAGCTGTTGTATCGTTAC 5170 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 5171 ACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 5229 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT----TAGCTAACCCCA 190 |||| ||||||| || ||||||| ||| || | | | || || || Sbjct 5230 GTTAAGGCCGCCTTTAACCGGGGTTTCCGTCGACATCAAATAGTAGTATATTCAATTATC 5289 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTGTTT- 248 || |||||| |||||||||||||| |||||| |||||| | | |||| | ||| Sbjct 5290 TCTGTTAACCAGCCGGCACCGGGCAGATATCACACTCTATACTTAGATTTTTCATCTTTC 5349 Query 249 -GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||||||||||||||||| | |||||||||| Sbjct 5350 AGCAGAGTGCTGTGTTTTAATTAAACAGTCG 5380 >seq3864 Length=859 Score = 125 bits (138), Expect = 2e-26 Identities = 168/225 (75%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 206 GCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTT 265 ||||||||||||||||| || ||||| || ||| || || ||| | ||||||||| Sbjct 2 GCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCACGGACCTGTGTTTT 61 Query 266 TAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAG-CAAGT-- 322 || ||||||||||| | |||||| ||| || || || ||| ||| | |||| Sbjct 62 TAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCT-CACACGCTCACGCCGGCAAGCAG 120 Query 323 CCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTT 382 | |||| | | |||| | ||||||||||||||||||| | | ||||||| |||||||| Sbjct 121 CGATCACGCG-ATCGGCCC-CCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTT 178 Query 383 -CCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 || ||| ||| ||| ||||| ||||||||||||| ||||| Sbjct 179 AACCACGA-TTCACTCGCACGCCTCGGTATTCTCTACCTGACCAC 222 >seq52867 Length=861 Score = 91.5 bits (100), Expect = 4e-16 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 336 CGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTC 395 |||| ||||||||||||||||||||| | |||||| ||||||||| || |||||||| Sbjct 728 CGGCATACCTTCTCCCGAAGTTACGGTATCAATTTGCCGAGTTCCTTCTCCTGAGTTCTC 669 Query 396 TCAAGCGCCTTGGTATTCTC 415 ||||||||||| | || ||| Sbjct 668 TCAAGCGCCTTAGAATACTC 649 >seq14038 Length=8189 Score = 91.5 bits (100), Expect = 4e-16 Identities = 272/414 (66%), Gaps = 17/414 (4%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || ||| || |||||||||| | | |||||||| |||||| | Sbjct 3756 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTGAG 3815 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| ||| | | | ||| | ||||| ||||||||||||||||||| | || Sbjct 3816 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 3875 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TC--GCGTTAG----CTAACC 187 | || ||||||| || | |||| ||| |||| | || || |||| |||| Sbjct 3876 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTCTCCTATTTTAGTCGTCTAAGT 3935 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 ||| |||||| || || |||||| | ||| |||||| | | || | | || Sbjct 3936 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 3995 Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTATCTTCGACCGGCA 304 ||| ||||||||||||| | ||||||||| ||| | | | ||| | | | Sbjct 3996 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 4055 Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 | | | || | | |||| | ||| ||||||||||| |||||||||| Sbjct 4056 TAACC---CG----ATATTATTCAGTTGGAATGGCACACCTTCTCCCTCAGTTACGGTGT 4108 Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | |||||| |||||||| ||| ||||| |||||| ||||||||||| Sbjct 4109 CAATTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 4162 >seq32551 Length=639 Score = 86.0 bits (94), Expect = 2e-14 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 344 CTTCTCCCGAAGTTACG-GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||| ||||||||||| |||| ||| ||| ||||||||| | |||||||||||||| Sbjct 555 CTTCTTCCGAAGTTACGCGTGCAATTT-GCCGAGTTCCTTCAACATAGTTCTCTCAAGCG 497 Query 403 CCTTGGTATTCTCTACCCAACCAC 426 ||||||||| ||||||| ||||| Sbjct 496 CCTTGGTATACTCTACCTGACCAC 473 >seq17964 Length=356 Score = 84.2 bits (92), Expect = 6e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 |||||| |||||| ||||| | | |||||| ||||||||| | |||||||||||| Sbjct 106 CCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCG 165 Query 403 CCTTGGTATTCTCTACCCAACCAC 426 ||||||||||||||||| ||||| Sbjct 166 CCTTGGTATTCTCTACCTGACCAC 189 >seq36348 Length=390 Score = 77.0 bits (84), Expect = 8e-12 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCATCGT 71 ||||||| || | | ||||||| | |||| ||| ||| ||||||||| | |||| Sbjct 303 GCATCTTTACTCGTAGTGCAATTTCGCCGAGT-TCGCGGTTGAGACAGCGGAGAAGTCGT 361 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACC 100 ||||||||||||||||||||||||||||| Sbjct 362 TACGCCATTCGTGCAGGTCGGAACTTACC 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1259157177600