Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq9272 500 3e-139 seq43058 262 1e-67 seq55660 228 2e-57 seq42306 201 3e-49 seq43559 150 5e-34 seq28198 140 1e-30 seq30523 102 2e-19 seq328 89.7 2e-15 seq463 82.4 2e-13 >seq9272 Length=831 Score = 500 bits (554), Expect = 3e-139 Identities = 417/502 (83%), Gaps = 11/502 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAA-TTGACGGGGACCCGCACAAGCGGTGGAGCA 59 |||| |||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||| Sbjct 646 TACGGCCGCAAGGTTAAAACTCAAATGAAGTTGACGGGGGCCCGCACAAGCGGTGGAGCA 587 Query 60 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCT 119 |||||||||||||||||||||||||||||||||||| |||||||| || || | | Sbjct 586 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTGGCCTTGACATGCTGAGAACTTT 527 Query 120 CTAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGT 177 | |||||| || ||| |||||||| || || ||||||| ||||||| |||||| Sbjct 526 CCAGAGATGGATTGGTG---CCTTCGGGA-ACTCAGACACAGGTGCTGCATGGCTGTCGT 471 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||||||||||||||||| |||||||||||||||||||||| || || Sbjct 470 CAGCTCGTGTCGTGAGATGTTGGGTTA-GTCCCGCAACGAGCGCAACCCTCGTCCTATGT 412 Query 238 TGCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTG 295 ||||| || | | | |||| |||| || ||||||||| | ||| |||||||||||| Sbjct 411 TGCCAGCACGTCATGGTGGGGACTCATAGGAGACTGCCGGGGTCAACTCGGAGGAAGGTG 352 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 |||| |||||||||||||||||||||||||| ||||||| ||| | ||||||||||| | Sbjct 351 GGGATGACGTCAAATCATCATGCCCCTTATGTCTTGGGCTTCACGCATGCTACAATGGCC 292 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 | |||| ||||| |||| |||| ||||| ||| ||||||| |||| || |||||||||| Sbjct 291 AGTACAGAGGGCTGCGATACCGTGAGGTGGAGCGAATCCCAAAAAGCTGGTCTCAGTTCG 232 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-A 474 ||| | |||||||||||||| ||||| ||| ||||||||||||| |||||||| | Sbjct 231 GATCGGGGTCTGCAACTCGACCCCGTGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAA 172 Query 475 TGCTACGGTGAATACGTTCCCG 496 ||| ||||||||||||||||| Sbjct 171 CGCTGCGGTGAATACGTTCCCG 150 >seq43058 Length=848 Score = 262 bits (290), Expect = 1e-67 Identities = 218/264 (83%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 233 TTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG-TGACAAACCGGAGGAA 291 ||||||||||||||| ||||||||||||||| || ||||| ||| || ||||||||| Sbjct 842 TTAGTTGCCATCATTCAGTTGGGCACTCTAAAGGAACCGCCGGGTGATAAGCCGGAGGAA 783 Query 292 GGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAAT 351 |||||||| |||||||| || ||||| |||||| | ||||||||||||||||||||||| Sbjct 782 GGTGGGGATGACGTCAAGTCCTCATGGCCCTTACGCGTTGGGCTACACACGTGCTACAAT 723 Query 352 GGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAG 411 || | |||| |||| || || | |||||| ||| |||| | ||||||| |||||| Sbjct 722 GGCAACTACAGTGGGCTGCAAACCTGCGAGGGTGAGCTAATCTCCAAAAGTTG-TCTCAG 664 Query 412 TTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCA 471 |||||||||| ||||| |||||| |||||| ||||||||||||||||| ||||| Sbjct 663 TTCGGATTGTTCTCTGCGACTCGAGAGCATGAAGGCGGAATCGCTAGTAATCGCGGATCA 604 Query 472 GCATGCTACGGTGAATACGTTCCC 495 |||||| |||||||||||||||| Sbjct 603 GCATGCCGCGGTGAATACGTTCCC 580 >seq55660 Length=463 Score = 228 bits (252), Expect = 2e-57 Identities = 174/206 (84%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 290 AAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACA 349 |||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1 AAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTACTACA 60 Query 350 ATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTC 409 |||| | ||||| ||| ||| || ||||||||| ||| ||||| |||| | |||| Sbjct 61 ATGGTCGGTACAACGGGAAGCAAAGCCGCGAGGTGGAGCCAATCCTTAAAAGCCGATCTC 120 Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 ||||||||||| || |||||||||| || |||||| ||||| ||||||||||| ||| Sbjct 121 AGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGTCGGAATTGCTAGTAATCGCGGAT 180 Query 470 CAGCATGCTACGGTGAATACGTTCCC 495 |||||||| |||||||||||||||| Sbjct 181 CAGCATGCCGCGGTGAATACGTTCCC 206 >seq42306 Length=487 Score = 201 bits (222), Expect = 3e-49 Identities = 170/204 (83%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 288 TACGGCCGCAAGGTA-AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 346 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||||||||||||||||| |||||||||||| | || Sbjct 347 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACC-TATCTTGACATCCACGGAATTTGG 405 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| | | ||||| ||| || | | |||||||| ||||||| ||||||||| Sbjct 406 CAGAGAT-GCCTTAGTGCCTTC-GGGAACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG 463 Query 181 CTCGTGTCGTGAGATGTTGGGTTA 204 ||||||| |||| ||||||||||| Sbjct 464 CTCGTGTTGTGAAATGTTGGGTTA 487 >seq43559 Length=532 Score = 150 bits (166), Expect = 5e-34 Identities = 145/182 (80%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 316 TGCCCCTTATGATTTGGG-CTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAA 374 || |||||||| |||| |||||||||||||||||||| ||| |||| ||| | Sbjct 1 TGGCCCTTATGGGCTGGGGCTACACACGTGCTACAATGGCGGTGACAGAGGGGAGCCAGG 60 Query 375 CCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCG 434 ||||||| | ||| ||||| |||| || |||||||| ||||| | ||||||||||| Sbjct 61 TCGCGAGGCCGAGCCGATCCCG-AAAGCCGT-CTCAGTTCAGATTGCACTCTGCAACTCG 118 Query 435 ACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCC 494 | |||||| ||||||||||||||||||| |||||||| || ||||||| |||||||| Sbjct 119 GGTGCATGAAGGTGGAATCGCTAGTAATCGTGGATCAGCACGCCACGGTGAGTACGTTCC 178 Query 495 CG 496 || Sbjct 179 CG 180 >seq28198 Length=1139 Score = 140 bits (154), Expect = 1e-30 Identities = 128/159 (81%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 337 CACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCA 396 ||||||||||||||||| | |||| |||| || | |||||||| ||| |||| | Sbjct 1 CACACGTGCTACAATGGCGACTACAGTGGGCTGCAATCCCGCGAGGGTGAGCTAATCTCC 60 Query 397 TAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCT 456 ||||| || ||||||||||||||| |||||||||||| |||||| ||||||||| Sbjct 61 AAAAGTCGT-CTCAGTTCGGATTGTTCTCTGCAACTCGAGAGCATGAAGGCGGAATCGCT 119 Query 457 AGTAATCGTAGATCAGCATG-CTACGGTGAATACGTTCC 494 |||||||| |||||||||| | ||||||||||||||| Sbjct 120 AGTAATCGCGGATCAGCATGCCCGCGGTGAATACGTTCC 158 >seq30523 Length=555 Score = 102 bits (112), Expect = 2e-19 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 24 AAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCG 83 || |||||||||||| || |||||||||||||||||||||||||||| |||||||||||| Sbjct 9 AATGAATTGACGGGG-CCTGCACAAGCGGTGGAGCATGTGGTTTAATCCGAAGCAACGCG 67 Query 84 AAGAACC-TTACCAAATCTTGACAT 107 |||||| |||||| ||||||| Sbjct 68 CAGAACCGTTACCAGCGTTTGACAT 92 >seq328 Length=2264 Score = 89.7 bits (98), Expect = 2e-15 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| Sbjct 711 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 652 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| | || | |||| |||| | ||| | | | | | || Sbjct 651 CTACACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCTAAAAATAGGATATAAATT 592 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| |||||||||| ||||| | ||| ||||||||||| ||| Sbjct 591 TTAAGGATTGTAGTCTGAAACTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 532 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 531 ACCATGTCACGGTGAAT 515 >seq463 Length=10439 Score = 82.4 bits (90), Expect = 2e-13 Identities = 131/186 (70%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | |||||| Sbjct 10437 CAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTCCTACACAAAGA 10378 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTTC---GGATTGT 421 | || ||| | || | |||| |||| | ||| | | | | | || ||||||| Sbjct 10377 GATGCAAAAATGTGAATTTAAGCTAATCTCTAAAAATAGGATATAAATTTTAAGGATTGT 10318 Query 422 AGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACG 481 |||||| |||||||||| ||||| | ||| ||||||||||| |||| |||| ||| Sbjct 10317 AGTCTGAAACTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCACG 10258 Query 482 GTGAAT 487 |||||| Sbjct 10257 GTGAAT 10252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1502040288000