Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq14834 161 2e-37 seq36348 98.7 2e-18 >seq14834 Length=342 Score = 161 bits (178), Expect = 2e-37 Identities = 167/214 (78%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||| |||||| |||| || ||| ||| ||||||||||| ||||| | |||| Sbjct 5 GGGTAGTTTAACTGGG-CGGTTGC-TCCTAAATG--AACGGAGGCGCTCAAAGGTTCCCT 60 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 |||| ||| ||| || || | | |||| | | || ||||| | ||||||| || || Sbjct 61 CAGCCTGGTTGGCAATCAGGTGGCGAGTGTAGTG-CACAAGGGAGCTTGACTGTGAGACG 119 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 | ||| |||||||||||||||||| |||| ||||||| |||||| || ||||| ||| Sbjct 120 GACGTGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGC 179 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||||| ||||||||||| ||| || |||||| Sbjct 180 CGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 213 >seq36348 Length=390 Score = 98.7 bits (108), Expect = 2e-18 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | | ||| ||||| ||||||||||| |||||| |||||||||||||||| Sbjct 117 GGGACAGTGCCTGGTGGGTAGTTTAACTGGGGCGGTTGCCTCCTAAAGAGTAACGGAGGC 58 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGG 227 || ||||| | |||||| | ||| ||| || || | | |||| || ||| |||| Sbjct 57 GCTCAAAGGTTCCCTCATCCTGGTTGGCAATCAGGTGTCGAGTGTAAGTGCACAAGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981119932800