Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq27462 203 5e-50 seq27795 159 5e-37 seq32311 127 3e-27 seq59396 123 4e-26 seq45297 122 1e-25 seq89888 116 5e-24 seq41423 93.3 6e-17 seq35040 91.5 2e-16 seq83680 77.0 5e-12 >seq27462 Length=1703 Score = 203 bits (224), Expect = 5e-50 Identities = 197/252 (78%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 1 CGATGCACGCCTTGACGCAGCGAGCCAGGACTTCTTCGCGCGCTTTTTTCGTCCAGGCCC 60 ||||||| |||||||||||||| ||||||||||||||||| || || | |||| | Sbjct 629 CGATGCAGGCCTTGACGCAGCGTGCCAGGACTTCTTCGCGGGCCTTCT-CGTCGATCTGG 571 Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120 || || ||||| || || | |||||||||||||| || ||||||||||| |||||||| Sbjct 570 GGCGCAGGCGCCTCCTCGATGACCTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCA 511 Query 121 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGG 180 ||||| | ||||| ||||||||| ||||| || || || |||||||||||||| || Sbjct 510 TAGAGGTGCACGGCGTTGCCCTGGCCATCGGAGAGCACCTGGACTTCCACGTGACGCGGA 451 Query 181 TTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAG 240 ||| ||| | || |||| ||||||||| | |||||| || |||||| ||||||| Sbjct 450 TTGCCGAGGAATTTCTCCATGTAGACCATGGAGTTGCCAAAGGCGGCGCCGGCTTCGGTC 391 Query 241 CGAGTCTGCTTG 252 | ||| ||||| Sbjct 390 TGGGTCAGCTTG 379 >seq27795 Length=716 Score = 159 bits (176), Expect = 5e-37 Identities = 148/184 (80%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 1 CGATGCACGCCTTGACGCAGCGAGCCAGGACTTCTTCGCGCGCTTTTTTCGTCCAGGCCC 60 ||||||| |||||||||||||| ||||||||||||||||| || || | |||| | | Sbjct 187 CGATGCAGGCCTTGACGCAGCGGGCCAGGACTTCTTCGCGGGCCTTCT-CGTCGAT-CTG 130 Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120 || || ||||| || || | ||||||||||||||||| ||||||||||| |||||||| Sbjct 129 GGCGCGGGCGCCTCCTCGATGACCTTCTGGTGACGACGCTGCAGCGAGCAGTCGCGGTCA 70 Query 121 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACA-GTACTTGCACTTCCACGTGACGTGG 179 ||||| | ||||| ||||||||| ||||| | | || || ||||||||||| || || Sbjct 69 TAGAGGTGCACGGCGTTGCCCTGGCCATCGGAAAGGCACCTGGACTTCCACGTGGCGCGG 10 Query 180 GTTG 183 ||| Sbjct 9 ATTG 6 >seq32311 Length=7208 Score = 127 bits (140), Expect = 3e-27 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||||||||| ||||||||||||| || |||||||| || || |||| || || || || Sbjct 3504 GCCCGGTGCTGGCGCTTCTTCCACGACTTTCTGGTGGCGGCGCTGCATAGAACAGTCACG 3563 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 |||||||| | |||||||| ||||||||| || | ||| || || | ||| | |||||| Sbjct 3564 CTCGCCCAGATAGATGGCGTTGCCCTGGCCATCAGCCAGAACCTGGATTTCGATGTGACG 3623 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 ||| || ||| ||||| |||| ||| ||||| Sbjct 3624 TGGATTTTCCAGATACTTCTCCATGTACACCAT 3656 >seq59396 Length=432 Score = 123 bits (136), Expect = 4e-26 Identities = 119/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 100 TGCAGCGAGCAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACT 159 ||||||||||| |||||||| ||||| | ||||| ||||||||| ||||| || || Sbjct 2 TGCAGCGAGCAGTCGCGGTCATAGAGGTGCACGGCGTTGCCCTGGCCATCGGAGAGCACC 61 Query 160 TGCACTTCCACGTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCG 219 || |||||||||||||| || ||| ||| | || |||| ||||||||| | |||||| Sbjct 62 TGGACTTCCACGTGACGCGGATTGCCGAGGAATTTCTCCATGTAGACCATGGAGTTGCCA 121 Query 220 AACCAGGCGCCCGCTTCGGAGCGAGTCTGCTTG 252 || |||||| ||||||| | ||| ||||| Sbjct 122 AAGGCGGCGCCGGCTTCGGTCTGGGTCAGCTTG 154 >seq45297 Length=584 Score = 122 bits (134), Expect = 1e-25 Identities = 121/155 (78%), Gaps = 5/155 (3%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| ||||| |||||||| |||| ||||||||||| || || |||| |||||| ||||| Sbjct 349 GCCGGGTGCGGGCGCTTCCTCCACCACCTTCTGGTGGCGGCGCTGCATCGAGCAGTCGCG 290 Query 117 GTCGCCCAGGTGGATGGCGTG----GCCCTGGCCGTCGGACAGTACTTGCACTTCCACGT 172 ||||||| | || |||| || |||||||||||||| ||| || || | ||||||| Sbjct 289 CTCGCCCA-GAGGCTGGCATGGCCCGCCCTGGCCGTCGGCCAGCACCTGGATCTCCACGT 231 Query 173 GACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACC 207 |||| || || |||| |||| |||| ||| ||| Sbjct 230 GACGCGGATTCTCCAGGAACTTCTCCATGTACACC 196 >seq89888 Length=471 Score = 116 bits (128), Expect = 5e-24 Identities = 120/156 (77%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 || || || ||||| ||||||||||| || || |||| |||||||||||| ||||||||| Sbjct 193 GGGGCCTCCTCCAGCACCTTCTGGTGGCGGCGCTGCAACGAGCAATCGCGCTCGCCCAGG 134 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTC 186 |||||||||| || | ||||||| | || || || || | || ||||| ||| Sbjct 133 TGGATGGCGTTACCGTTGCCGTCGCCGAACACCTGAAC-TCGATATGCCGTGGATTGCCG 75 Query 187 AGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAAC 222 ||||||||||||| ||||| | | || ||||||| Sbjct 74 AGGTACTTTTCCATATAGACGGTGGCGTCGCCGAAC 39 >seq41423 Length=557 Score = 93.3 bits (102), Expect = 6e-17 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113 |||| ||| ||||| | ||||||||| |||||||||| ||||| |||| ||||||||| Sbjct 416 CAGGTTCGGCGCCGGGGTTTCTTCCAGCACCTTCTGGTTGCGACGCTGCACCGAGCAATC 357 Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCA 169 ||| |||| ||| || ||| ||||||||| ||| | || |||||||||| Sbjct 356 GCGCACGCCGAGGGCGAGCACGTCGCCCTGGCCATCGCCGAACACCTGCACTTCCA 301 >seq35040 Length=3208 Score = 91.5 bits (100), Expect = 2e-16 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 51 GTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCA 110 ||| | ||| || || || || ||||| || |||||||||||||| || |||| |||||| Sbjct 251 GTCGATGCCGGGCGCAGGAGCCTCTTCGAGCACCTTCTGGTGACGTCGCTGCAACGAGCA 192 Query 111 ATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCAC 170 |||||| ||| || |||| ||||||| ||| |||| |||| || || | || || Sbjct 191 ATCGCGACTGCCGAGCCAGATGCCGTGGCCGTGGTCGTCACACAGCACCTGGATCTCGAC 132 Query 171 GTGACGTGGGTTGGTCAGGTACTTT-TCCAGGTAGAC 206 || || || ||| || | | ||| ||||| ||||| Sbjct 131 ATGGCG-CGGATGGCCAAGAAATTTCTCCAGATAGAC 96 >seq83680 Length=559 Score = 77.0 bits (84), Expect = 5e-12 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 49 TCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAG 108 ||||||| ||| || || || ||||| ||||| ||||||||||| || || |||| |||| Sbjct 442 TCGTCCATGCCAGGGGCGGGTGCTTCCTCCAGCACCTTCTGGTGGCGGCGCTGCACCGAG 501 Query 109 CAATCGCGGTCGCCCAGGTGGA 130 || ||||| ||| ||||| || Sbjct 502 CAGTCGCGCTCGAACAGGTAGA 523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735070961000