Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq6483 614 2e-173 seq35720 289 1e-75 seq51469 284 5e-74 seq35719 127 8e-27 seq24889 107 7e-21 seq59726 95.1 5e-17 seq42206 75.2 4e-11 >seq6483 Length=2269 Score = 614 bits (680), Expect = 2e-173 Identities = 485/575 (84%), Gaps = 6/575 (1%) Strand=Plus/Plus Query 23 GTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGACGAAGGATTTGCA 82 ||||||| |||| | ||| |||||||| |||||||| ||||| |||||| | ||| Sbjct 823 GTGGCCT-GCTTGGCCTTG--GAGGCGTTGGCCGAGAAGCGGCT-GACGAACTGCT-GCA 877 Query 83 GCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGG 142 | |||| |||||| || ||||| ||||||||||||||||||||| ||||||||| |||| Sbjct 878 GTTCGGCGATCTGGGCTTTCTT-CTTGGCGTTGTCCGACAGCAGGCGCTCGCGGGCCTGG 936 Query 143 GTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCC 202 || ||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct 937 GTGGCCGCGGTCATGTACTCGTCGTAGTTGCCGGGGAACAGGCGCAGTTCGCCATAGTCC 996 Query 203 AGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATC 262 ||||| ||||||||||| || ||||||||||||||||| || ||||| || ||||||||| Sbjct 997 AGGTCGGCCATGTGGGTGCAGACGCTGTTCAGGAAGTGGCGATCGTGGGAAATGATGATC 1056 Query 263 ATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAG 322 || |||| || | |||||| ||||||||||||||||||||||||||||| | Sbjct 1057 ATGGTGCTGTTGCGGGCGACCAGGATGCCTTCCAGCCAGCGGATGGTGTTGATGTCCAGG 1116 Query 323 TGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGC 382 |||||||||||||||||||||| ||||| ||| |||||||| || ||||||||||||||| Sbjct 1117 TGGTTGGTCGGTTCGTCGAGCAGCAGCAATTCCGGATCGGAGAAGAGCGCCTGGGCCAGC 1176 Query 383 AATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGC 442 | || |||||||||||||| |||| || ||||||| || ||||||||||| ||| | Sbjct 1177 AGCACGCGCAGCTTCCAGCCGGGGGCGACGGCGCTCATGGGGCCGAAGTGCTGGTCCTGG 1236 Query 443 GGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATC 502 || || ||||| ||||||||||| || |||||||||| |||||||||||||||||| Sbjct 1237 GGGATGCCCAGGCCCAGCAGCAGTTCGCCGGCACGGGCTTCGGCGGTGTAGCCGTCGTAT 1296 Query 503 TCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGC 562 |||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1297 TCGGCGAACTGGACCTCCAGCTCGGCCACGGCCATGCCGTCGTCTTCGCTCATTTCCGGG 1356 Query 563 AGCGAGTAAATACCATCACGCTCGGCCTTGACCTT 597 || || || || | || ||||||||||||||||| Sbjct 1357 AGGGAATAGATGCGGTCGCGCTCGGCCTTGACCTT 1391 >seq35720 Length=1232 Score = 289 bits (320), Expect = 1e-75 Identities = 394/546 (72%), Gaps = 3/546 (1%) Strand=Plus/Minus Query 40 TTTCGAGGCGTTCGCCGAGAAACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGCGCC 99 ||| || ||||| || || ||||| ||| || || | |||| |||| || ||||| Sbjct 695 TTTAGAAGCGTTGGCACTAAAGCGGCT-GACAAACGACT-GCAGATCGGCAATTTGCGCT 638 Query 100 TTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTA 159 || |||||||||||| |||| | ||| | || || | |||||| ||| ||||||| || Sbjct 637 TT-TTTCTTGGCGTTATCCGCTAACAGACGTTCACGCGCCTGGGTGGCCGCGGTCATATA 579 Query 160 CTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGT 219 || || || || || | | | |||||||||||| |||||||| || |||||||| || Sbjct 578 TTCATCATAATTACCGGAATAAACGCGCAGCTCGCCATAGTCCAGATCGGCCATGTGCGT 519 Query 220 ACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTG 279 || || | || ||||||||||||||||| || ||||| ||||| |||| || | Sbjct 518 GCAGACCATATTGAGGAAGTGACGGTCGTGCGAAATGATAATCATGGTGCTGTCGCGTTC 459 Query 280 GGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTC 339 | | | | | |||||||| |||||||| | ||| |||| || ||||||||||||||| Sbjct 458 GTTTAACACCTGCTCCAGCCAACGGATGGTATCGATATCCAGGTTGTTGGTCGGTTCGTC 399 Query 340 GAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCA 399 |||| || | || |||| ||||||| |||||||| | | || || | || | Sbjct 398 CAGCAGCAAAATATCCGGATTAGAAAACAAGGCCTGGGCTAAAAGAACGCGTAATTTAAA 339 Query 400 GCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAG 459 ||| || | | |||||||||||| ||| | ||||| || | ||| || |||| || || Sbjct 338 GCCTGGCGCAATTTCGCTCATCGGCCCGTAATGCTGTTCAACCGGGATGCCCACGCCAAG 279 Query 460 CAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTC 519 | | |||||||| || ||||| ||| |||| || ||||| ||| | ||| ||| Sbjct 278 TAATAATTCACCGGCGCGCGATTCCGCGCTGTAACCATCCATTTCGCCATACTGTACTTC 219 Query 520 CAGCTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATC 579 ||| || || || ||| || |||||||||||||| ||||| || ||||||| || Sbjct 218 CAGGTCTGCGACTTTGTAGCCTTCCTCTTCGCTCATTTCGGGCAGGGAATAAATACGGTC 159 Query 580 ACGCTC 585 ||| || Sbjct 158 ACGTTC 153 >seq51469 Length=510 Score = 284 bits (314), Expect = 5e-74 Identities = 226/264 (86%), Gaps = 7/264 (3%) Strand=Plus/Minus Query 1 TCGATCGCCTTTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAA 60 |||||| ||| ||| || || ||||||| |||| | ||| || ||||| |||||||| Sbjct 282 TCGATCTGCTT-GGCCCGCGAGGTGGCCT-GCTTGGCCTTG--GAAGCGTTGGCCGAGAA 227 Query 61 ACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGA 120 ||||| |||||||| | ||||| |||| |||||| || ||||| ||||||||||||||| Sbjct 226 GCGGCT-GACGAAGG-TCTGCAGTTCGGCGATCTGGGCTTTCTT-CTTGGCGTTGTCCGA 170 Query 121 CAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAA 180 |||||| ||||||||| |||||| ||| ||||||||||||||||||||||||| ||||| Sbjct 169 CAGCAGGCGCTCGCGGGCCTGGGTGGCCGCGGTCATGTACTCGTCGTAGTTGCCGGGGAA 110 Query 181 CAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTG 240 ||||||||| ||||| ||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 109 CAGGCGCAGTTCGCCATAGTCCAGGTCGGCCATGTGGGTGCAGACGCTGTTCAGGAAGTG 50 Query 241 ACGGTCGTGAGAGATGATGATCAT 264 || ||||| || ||||||||||| Sbjct 49 GCGATCGTGGGAAATGATGATCAT 26 >seq35719 Length=702 Score = 127 bits (140), Expect = 8e-27 Identities = 164/225 (73%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 85 TCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGT 144 |||| || ||||| || |||||||||||| |||| | || | || || | |||||| Sbjct 702 TCGGCAATTTGCGCTTT-TTTCTTGGCGTTATCCGCTAACAAACGTTCACGCGCCTGGGT 644 Query 145 CGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAG 204 ||| ||||||| || || || || || || | | | ||| |||||||| |||||||| Sbjct 643 GGCCGCGGTCATATATTCATCATAATTACCGGAATAAACGCGTAGCTCGCCATAGTCCAG 584 Query 205 GTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCAT 264 || |||||||| || || || | || ||||||||||||||||| || ||||| ||||| Sbjct 583 ATCGGCCATGTGCGTGCAGACCATATTGAGGAAGTGACGGTCGTGCGAAATGATAATCAT 524 Query 265 CAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGT 309 |||| || | | | | | | |||||||| |||||||| Sbjct 523 GGTGCTGTCGCGTTCGTTTAACACCTGCTCCAGCCAACGGATGGT 479 >seq24889 Length=582 Score = 107 bits (118), Expect = 7e-21 Identities = 99/124 (80%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 292 TTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCAC 351 |||||||||| ||||| | |||||||||||| ||||| ||||||||||||| ||||| Sbjct 528 TTCCAGCCAGGCGATGGCGCCGATGTCCAAGTG-TTGGTGGGTTCGTCGAGCAGCAGCAG 470 Query 352 TTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACAC 411 || || |||| | ||||||||||||||||| || ||| || |||||| ||||| Sbjct 469 ATCCGGCTCGGCCACCAGCGCCTGGGCCAGCAGCACGCGCCGCCGCCAGCCGCCGGACAG 410 Query 412 TTCG 415 |||| Sbjct 409 TTCG 406 >seq59726 Length=509 Score = 95.1 bits (104), Expect = 5e-17 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 194 CCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAG 253 ||| |||| | || || || || |||||||| ||||||||||||||||||||||| | Sbjct 223 CCGAAGTCAATATCCGCGATATGCGTACACACCGTGTTCAGGAAGTGACGGTCGTGACTG 282 Query 254 ATGATGATCATCAG-GCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTT 312 | | ||| | ||| || | | | | |||| |||||||||||| | |||| | Sbjct 283 ACTACGATAA-CAGTGCCGTCATACGATGCAAGGAAGTTTTCCAGCCAGTGAATGGACTC 341 Query 313 GATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAG 348 |||||||||||||||||| || || || |||| ||| Sbjct 342 GATGTCCAAGTGGTTGGTAGGCTCATCCAGCAGCAG 377 >seq42206 Length=1006 Score = 75.2 bits (82), Expect = 4e-11 Identities = 103/142 (73%), Gaps = 8/142 (6%) Strand=Plus/Plus Query 233 AGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAAC-GC---TGGGTCAGGAT 288 ||||||| |||||||| ||||| | ||||| || || | || || | ||| Sbjct 667 AGGAAGTCGCGGTCGTGGGAGATCAGGATCAGGGTGCCGGGATAGCCCTTGAGCCAG--- 723 Query 289 ATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAG 348 | |||||||||| |||||| || | |||| ||||||||| ||||||||||||| ||| Sbjct 724 -TCTTCCAGCCAGAGGATGGCGTCCAGATCCAGGTGGTTGGTGGGTTCGTCGAGCAGCAG 782 Query 349 CACTTCAGGATCGGAAAACAGC 370 || || || | ||| | |||| Sbjct 783 CATGTCGGGCTTGGACAGCAGC 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1879071658800