Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001212.1 Length=311 Score E Sequences producing significant alignments: (Bits) Value seq4397 100 5e-19 >seq4397 Length=4066 Score = 100 bits (110), Expect = 5e-19 Identities = 203/295 (69%), Gaps = 16/295 (5%) Strand=Plus/Plus Query 20 CCGCGTTTCTGGCTGTTATGGCTGGGGCTCGGCCTGCTGTGGCTGGTCACCCAGTTGCCC 79 || |||| |||| | | |||||||||||||| ||||| |||||||| || ||||| Sbjct 2875 CCACGTTATTGGCCGCTCTGGCTGGGGCTCGGTCTGCTCTGGCTGGTGGTGCAACTGCCC 2934 Query 80 TAC--CGTGC-GCTGT---TGACCATTGGTCGCCTGCTGGGTGCGGGGATGTACCGTGTG 133 ||| ||||| |||| || || || | | ||||| | | || | || Sbjct 2935 TACGCCGTGCTGCTGCGTCTGGCCCGGGGACTCG-GCTGGATCT-----TCTATCACGTC 2988 Query 134 GCCGGCGAACGCCGCCGCATCGCCGCGCGAAACCTGGAACTGTGCTTCCCGGAAAAATCC 193 ||||| | ||||| ||||||| || || |||||||| ||||| || | || Sbjct 2989 GCCGGGCAGCGCCGGGCCATCGCCCGCCGCAATCTGGAACTCTGCTTTCCCCAGC--TCG 3046 Query 194 GCGAAA--GAGCGTAAACATTTGCTTAAAGAAAACTTTGCCTCCACCGGCATCGCCTTCT 251 |||| | |||| | | ||||| | ||||| ||| || || ||| ||| | Sbjct 3047 ACGAACAGGCGCGTGACCTGTTGCTCAGGCGCAACTTCGCCAGCAGCGCCATGGCCCTGC 3106 Query 252 TTGAGATGGCCATGAGCTGGTGGTGGTCGCGCCAGCGCCTGGCGCGCCTGGCCCA 306 | |||||||||||||||||||||||| |||| ||||||||||| || ||||| || Sbjct 3107 TGGAGATGGCCATGAGCTGGTGGTGGCCGCGGCAGCGCCTGGCCCGGCTGGCGCA 3161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 891636681600