Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq59592 268 3e-69 seq7670 206 1e-50 seq7671 174 6e-41 seq35095 154 5e-35 seq5275 140 1e-30 seq90617 138 4e-30 seq94466 132 2e-28 seq39714 132 2e-28 seq67605 91.5 5e-16 seq42980 82.4 3e-13 seq39713 80.6 1e-12 seq20795 80.6 1e-12 >seq59592 Length=613 Score = 268 bits (296), Expect = 3e-69 Identities = 325/439 (74%), Gaps = 14/439 (3%) Strand=Plus/Plus Query 163 AACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGT 222 ||||||||||| | |||| |||||| |||| || ||| || || |||||||| || | Sbjct 1 AACCAGCTATCTCCGAGTTCGATTGGAATTTCTCCGCTACCCCCACCTCATCCCCGCACT 60 Query 223 TTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATG 282 ||||||| | |||||||||| |||||| || ||||| ||||| |||| || | Sbjct 61 TTTCAACGTGCGTGGGTTCGGACCTCCAGTACGTGTTACCGTACCTTCATCCTGGACAGG 120 Query 283 GATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT-ACGCCCTATTCGGACTCGC 341 | |||||||| | ||||||||| || ||| || |||||||||| ||||||| Sbjct 121 GGTAGATCACCCGGTTTCGGGTCTACGTCCACGTACTAATGTCGCCCTATTCAGACTCGC 180 Query 342 TTTCGCTACGGCTAC-CCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTC 400 ||||||| ||||| | | | | ||||||| || |||| ||||||| || || Sbjct 181 TTTCGCTGCGGCTCCGGCTTCTCACCTTAACCTTGCACGGGAACG-TAACTCGCCGGTTC 239 Query 401 ATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTG 460 ||||| ||||||||||||| ||||| | | || | |||| ||| ||| Sbjct 240 ATTCTACAAAAGGCACGCCATCACC-----CATTAA------TCGGGCTCTGACTTTTTG 288 Query 461 TAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCT 520 || ||||| |||||||||| |||||||||||||| | ||||| |||||||||||||||| Sbjct 289 TAAGCACACGGTTTCAGGTTCTATTTCACTCCCCTTCCGGGGTCCTTTTCACCTTTCCCT 348 Query 521 CACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCC 580 ||||||||| | | ||||||||| | | ||||||||||| |||| | | |||||| | | Sbjct 349 CACGGTACTGCTTCACTATCGGTCGCTAGGGAGTATTTAGCCTTACCAGATGGTCCTGGC 408 Query 581 AGATTCACACGAAATTTCA 599 ||||||| ||| ||||| Sbjct 409 AGATTCATACGGGGTTTCA 427 >seq7670 Length=301 Score = 206 bits (228), Expect = 1e-50 Identities = 215/276 (78%), Gaps = 7/276 (3%) Strand=Plus/Plus Query 105 CAGTGCTCTACCTCCGGGAA-GAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGA 163 |||||||||||| || || || ||| | | |||| |||||||| ||||| ||||| Sbjct 1 CAGTGCTCTACCCCCCAGAGTGATACATGAGGCGCT--ACCTAAATAGCTTTCGAGGAGA 58 Query 164 ACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTT 223 |||||||||| | || |||||| ||||||||| || ||||||| |||||||||| || Sbjct 59 ACCAGCTATCTCCGAGCTTGATTAGCCTTTCACTCCGATCCACAAGTCATCCCCTGCCTT 118 Query 224 TTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283 |||||| ||||||||||||||||||| | || ||||| ||||||||||| ||||| Sbjct 119 TTCAACGGAAGTGGGTTCGGTCCTCCAGTCAGTGTTACC--TACTTCAACCTGCTCATGG 176 Query 284 ATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTT 343 ||||||| | | ||||||||| | || ||| | |||||||||| ||||||||| Sbjct 177 ATAGATCGCCCGGTTTCGGGTCTATTCCCAGCGACT-AGACGCCCTATTAAGACTCGCTT 235 Query 344 TCGCTACGGCTACCCCACACGGGTTAACCTCGCGAC 379 |||||||| || ||| | | |||||| ||||| || Sbjct 236 TCGCTACGCCTCCCCTATTC-GGTTAAGCTCGCCAC 270 >seq7671 Length=245 Score = 174 bits (192), Expect = 6e-41 Identities = 172/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 161 AGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCA 220 ||||||||||||| | || |||||| ||||||||| || ||||||| |||||||||| Sbjct 1 AGAACCAGCTATCTCCGAGCTTGATTAGCCTTTCACTCCGATCCACAAGTCATCCCCTGC 60 Query 221 GTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCA 280 |||||||| ||||||||||||||||||| | || ||||| | ||||||||| || Sbjct 61 CTTTTCAACGGAAGTGGGTTCGGTCCTCCAGTCAGTGTTACCTAC---TCAACCTGCTCA 117 Query 281 TGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCG 340 |||||||||| | | ||||||||| | || ||| | |||||||||| |||||| Sbjct 118 TGGATAGATCGCCCGGTTTCGGGTCTATTCCCAGCGACT-AGACGCCCTATTAAGACTCG 176 Query 341 CTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGAC 379 ||||||||||| || ||| | | |||||| ||||| || Sbjct 177 CTTTCGCTACGCCTCCCCTATTC-GGTTAAGCTCGCCAC 214 >seq35095 Length=430 Score = 154 bits (170), Expect = 5e-35 Identities = 183/244 (75%), Gaps = 13/244 (5%) Strand=Plus/Minus Query 335 GACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGC 394 |||||||||||||| || |||| || ||| |||| ||||| | ||| || || | Sbjct 428 GACTCGCTTTCGCTGCGCCTACACCTATCGGCTTAAGCTCGCTTGA-AACATTAAGTCAC 370 Query 395 AGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGAC 454 || | |||| | ||| ||| |||| |||| || ||| || | | || || || | Sbjct 369 AGACCCATTATGCAAGAGGTACGCTGTCA---GG--CCTCAAGGACCCTCCAACTGC--- 318 Query 455 GGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA-GGGGTACTTTTCACC 513 ||||||||| |||||||||||| ||||||||||| | ||||| ||||||||| Sbjct 317 ---TTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACC 261 Query 514 TTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGG 573 |||||||||||||||| || ||||||||||| | | |||||||||||||| |||||| Sbjct 260 TTTCCCTCACGGTACTAGTTCGCTATCGGTCGCATACGAGTATTTAGGCTTGGAGGGTGG 201 Query 574 TCCC 577 |||| Sbjct 200 TCCC 197 >seq5275 Length=552 Score = 140 bits (154), Expect = 1e-30 Identities = 118/144 (82%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACT 506 |||| || | ||||| ||| | |||||||||| |||||||||||||| | | ||||| || Sbjct 1 CTCCCACTGCTTGTACGCATACGGTTTCAGGTTCTATTTCACTCCCCTCTCCGGGGTTCT 60 Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566 |||| |||||||||||||||||| || | |||||||||| |||||||||||| ||| Sbjct 61 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGG 120 Query 567 CGGGTGGTCCCGCCAGATTCACAC 590 || ||||||| ||| ||||| || Sbjct 121 AGGATGGTCCCCCCATATTCAGAC 144 >seq90617 Length=344 Score = 138 bits (152), Expect = 4e-30 Identities = 207/289 (72%), Gaps = 9/289 (3%) Strand=Plus/Plus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAGC-TTGTGGGCCCCCTAGACCATCCAGTGC 110 |||||||||||||||| ||| | ||||| | ||| ||||||| | | ||| ||||| Sbjct 63 CGGCATTCGGAGTTTGACTGAGCTTGGTAACCCTTGCGGGCCCCGCACCCAATC-AGTGC 121 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||||||| || | | ||| ||| |||||| |||| |||||||||| Sbjct 122 TCTACCTCCGCGACTCATCTTCCGAGGCTAGCCCTAAAGCTATTT-----AGAACCAGCT 176 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 ||| | |||| |||||| |||| || ||| || || |||||||| || |||||||| Sbjct 177 ATCTCCGAGTTCGATTGGAATTTCTCCGCTACCCCCACCTCATCCCCGCACTTTTCAACG 236 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | |||||||||| |||||| || ||||| ||||| |||| || || |||||| Sbjct 237 TGCGTGGGTTCGGACCTCCAGTACGTGTTACCGTACCTTCATCCTGGACA-GGGTAGATC 295 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCAT-ACGCCCTATTCGGACT 338 || | ||||||||| || ||| || |||||||||| |||| Sbjct 296 ACCCGGTTTCGGGTCTACGTCCACGTACTAATGTCGCCCTATTCAGACT 344 >seq94466 Length=294 Score = 132 bits (146), Expect = 2e-28 Identities = 124/156 (79%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 447 GCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA---GGGGT 503 |||||||| | |||| ||| ||||||||||| ||||||||| ||||| | | ||| Sbjct 8 GCTCCGACCGCTTGTGGGCGTCTGGTTTCAGGTTCTATTTCAC--CCCGCTACTCGCGGT 65 Query 504 ACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCT 563 |||||||||| ||||||||||||||| | | |||||||||||| |||||||||||| || Sbjct 66 ACTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 125 Query 564 TAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 | |||||||| | |||||||||| ||| || Sbjct 126 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 161 >seq39714 Length=362 Score = 132 bits (146), Expect = 2e-28 Identities = 216/303 (71%), Gaps = 6/303 (2%) Strand=Plus/Minus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||| ||||| |||| | ||||| |||| | ||| | | ||||| | || ||||||| Sbjct 299 GACGACGGACCTTAG-CACCCGCCGTCTGTCTCCCG-GATATCACTCCTAGGTATTCGGA 242 Query 63 GTTTGGTT-GATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120 |||||||| || || |||| | || | | |||| | ||||||||||||||||| || Sbjct 241 GTTTGGTTAGAGTT-GGTAGATCTCGCGACCCCCGCAT-CCATCCAGTGCTCTACCCCCC 184 Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180 | || ||| || |||| ||| ||||| |||||||||||||| | | Sbjct 183 AGGGTGTCCATCCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGC 124 Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240 ||||||||||||||||||||| |||| |||||| | | |||||||| | | | |||| Sbjct 123 TTGATTGGCCTTTCACCCCTAAGCACAACTCATCCGGTAACTTTTCAACGTTAATCGGTT 64 Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300 ||| |||||| || ||||| ||||| |||| |||| ||||||| | | ||| Sbjct 63 CGGACCTCCAGTGTGTGTTACCACACCTTCATCCTGGTCATGCATAGATCGCCGGGTTTC 4 Query 301 GGG 303 ||| Sbjct 3 GGG 1 >seq67605 Length=289 Score = 91.5 bits (100), Expect = 5e-16 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 ||||||||||||||||||| || | |||||||||||||| | |||||||| | ||||||| Sbjct 1 ACTTGTCCGCTATCGGTCATCAGGAAGTATTTAGGCTTACCAGGTGGTCCTGGCAGATTC 60 Query 587 ACACGAAATTTCA 599 |||||| ||| || Sbjct 61 ACACGAGATTCCA 73 >seq42980 Length=269 Score = 82.4 bits (90), Expect = 3e-13 Identities = 93/122 (76%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAGC-TTGTGGGCCCCCTAGACCATCCAGTGC 110 |||||||||||||||| ||| | ||||| | ||| ||||||| | | ||| ||||| Sbjct 127 CGGCATTCGGAGTTTGACTGAGCTTGGTAACCCTTGCGGGCCCCGCACCCAATC-AGTGC 69 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||||||| || | | ||| ||| |||||| ||||||||||||||||||| Sbjct 68 TCTACCTCCGCGACTCATCTTCCGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCAGCT 9 Query 171 AT 172 || Sbjct 8 AT 7 >seq39713 Length=308 Score = 80.6 bits (88), Expect = 1e-12 Identities = 117/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCT 111 || ||||||||||||||| | |||| | || | | |||| | |||||||||||| Sbjct 162 GGTATTCGGAGTTTGGTTAGGGTTGGTAGATCTCGCGACCCCCGCAT-CCATCCAGTGCT 104 Query 112 CTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTA 171 ||||| || | | | ||| || |||| ||| ||||| ||||||||||||| Sbjct 103 CTACCCCCTACGGTATTCGCTCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTA 44 Query 172 TCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATC 214 | | | ||||||||||||||||||||| |||| ||||| Sbjct 43 TTTCCCGGCTTGATTGGCCTTTCACCCCTAAACACAACTCATC 1 >seq20795 Length=415 Score = 80.6 bits (88), Expect = 1e-12 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| ||||||||| |||| | | |||||||||| ||||||||||||||||| Sbjct 354 GGTTTCACGTACTATTTAACTCTCTATTCAGAGTACTTTTCAACTTTCCCTCACGGTACT 295 Query 530 TGTCCGCTATCGGT 543 ||| |||||||||| Sbjct 294 TGTTCGCTATCGGT 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1815231667200