Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001250.1 Length=167 Score E Sequences producing significant alignments: (Bits) Value seq22231 105 6e-21 seq51901 100 2e-19 >seq22231 Length=2364 Score = 105 bits (116), Expect = 6e-21 Identities = 123/161 (76%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 1 TCGACCCTAACCTGTGCACCCAGTGCGTCGGTCACTACGACGAACCGCAGAGCCAGCAGG 60 |||| || |||||||||||| ||||||| || |||||||||||||| ||| ||||||||| Sbjct 426 TCGATCCGAACCTGTGCACCGAGTGCGTGGGCCACTACGACGAACCCCAGTGCCAGCAGG 485 Query 61 TATCGCCCGGTGGATTCGCATTTCCGCTGGACGAGGCACACCCCGAGACGGAAGAGCAGT 120 | | |||||||||| | ||| | || || |||||| || |||||| | |||||| Sbjct 486 TCT-GCCCGGTGGACT-GCA-TCCCCCTCGACGAGAACCATGTCGAGACCAAGGAGCAG- 541 Query 121 TTGATGGAGAAGTACCGCAAGATTACCGGTAAGGCCTAAGC 161 || || ||||| | ||||| | ||| |||||| ||| Sbjct 542 CTGCACGACAAGTATCTGAAGATCAGCGGCCAGGCCTGAGC 582 >seq51901 Length=1064 Score = 100 bits (110), Expect = 2e-19 Identities = 119/156 (76%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 6 CCTAACCTGTGCACCCAGTGCGTCGGTCACTACGACGAACCGCAGAGCCAGCAGGTATCG 65 || |||||||||||| ||||||| || |||||||||||||| ||| |||||||||| | | Sbjct 2 CCGAACCTGTGCACCGAGTGCGTGGGCCACTACGACGAACCCCAGTGCCAGCAGGTCT-G 60 Query 66 CCCGGTGGATTCGCATTTCCGCTGGACGAGGCACACCCCGAGACGGAAGAGCAGTTTGAT 125 ||||||||| | ||| | || || |||||| || |||||| | |||||| || Sbjct 61 CCCGGTGGACT-GCA-TCCCCCTCGACGAGAACCATGTCGAGACCAAGGAGCAG-CTGCA 117 Query 126 GGAGAAGTACCGCAAGATTACCGGTAAGGCCTAAGC 161 || ||||| | ||||| | ||| |||||| ||| Sbjct 118 CGACAAGTATCTGAAGATCAGCGGCCAGGCCTGAGC 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434650655200