Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001262.1 Length=237 Score E Sequences producing significant alignments: (Bits) Value seq8423 232 9e-59 seq50469 104 3e-20 >seq8423 Length=1418 Score = 232 bits (256), Expect = 9e-59 Identities = 183/213 (86%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83 |||||||| ||||| ||||||||||||||||| |||||||||||||| |||| ||||||| Sbjct 1054 TCGAGATC-AGGAAGGCGGCGGTCTTGCCGGTACCGGTCTGGGCGCGACCGA-TGGCGTC 1111 Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTGCAGTACGGGAA 143 || ||| |||||||| |||||||||| |||||| | |||||||||||||| || || Sbjct 1112 CTT-GCCCTTGAGGGTGAAGCCCAGCACCT-GCGCCT-GAATCGGCGTGCAGTAGGGAAA 1168 Query 144 ACCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGGCCAGTTTGAAATCGTGGAAGCGGGT 203 || ||||| |||||| |||||||||| ||| |||| ||||| |||||||||||||| Sbjct 1169 GCCGAGGTCATGGATGCCGTGCATCAGCCGCGGATCCAGCTTGAAGTCGTGGAAGCGGGT 1228 Query 204 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTC 236 |||||||||||| |||||||| ||||||||||| Sbjct 1229 CTTGCCTTCCTGCGGCTCGACCACGAAGTCTTC 1261 >seq50469 Length=511 Score = 104 bits (114), Expect = 3e-20 Identities = 93/109 (85%), Gaps = 6/109 (6%) Strand=Plus/Plus Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83 |||||||| ||||| |||||||||| |||||| |||||||||||||| ||| |||||||| Sbjct 409 TCGAGATC-AGGAAGGCGGCGGTCT-GCCGGTACCGGTCTGGGCGCGACCG-ATGGCGTC 465 Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTG 132 ||||| |||||||| |||||||||| ||||| || ||||||||| Sbjct 466 -CTTGCCCTTGAGGGTGAAGCCCAGCACCT-GCGCC-TGAATCGGCGTG 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658367904200