Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001265.1 Length=174 Score E Sequences producing significant alignments: (Bits) Value seq9105 136 4e-30 seq2939 77.0 3e-12 >seq9105 Length=2254 Score = 136 bits (150), Expect = 4e-30 Identities = 128/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 2 CGAACACAAGATGCTCTACAGCTTGCAAGGTGAAGTCCCGGAAGAGCTGTACACCGTGCC 61 ||| |||||| ||||||| || |||| || || || ||||||||| || || | || Sbjct 163 CGAGCACAAGCTGCTCTATGGCATGCAGGGCGAGGTGCCGGAAGAGTCCTATGCCATCCC 104 Query 62 CTTCGGCGAAGCCAACTTTGTGCGCGAAGGCCAGGACGTGACCCTGGTGACCTACGGGCG 121 ||||||||| |||| ||| ||||||| ||| | ||||| | ||| | ||||| || || Sbjct 103 CTTCGGCGAGGCCAGCTTCCTGCGCGAGGGCGACGACGTCAGCCTCATCACCTATGGCCG 44 Query 122 CATGGTGCACATCGCCCTGGAAGCCGCCGCCAACCTGGCGCGC 164 ||||||||| | ||| |||| ||||||||||||||||||||| Sbjct 43 GATGGTGCACCTGGCCATGGACGCCGCCGCCAACCTGGCGCGC 1 >seq2939 Length=3393 Score = 77.0 bits (84), Expect = 3e-12 Identities = 76/97 (78%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 73 CCAACTTTGTGCGCGAAGGCCAGGACGTGACCCTGGTGACCTACGGGCGCATGGTGCACA 132 ||| ||| ||||||| || | ||||| | ||| | ||||| || || ||||||||| Sbjct 64 CCAGCTTCCTGCGCGAGGGTGACGACGTCAGCCTCATCACCTATGGCCGGATGGTGCACC 123 Query 133 TCGCCCTGGAAGCCGCCGCCAACCTGGCGCGCCAGGG 169 | ||| |||| ||||| |||||||||||||| ||||| Sbjct 124 TGGCCATGGACGCCGCTGCCAACCTGGCGCG-CAGGG 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457022380100