Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq5275 282 1e-73 seq7670 264 3e-68 seq7671 260 3e-67 seq59592 242 9e-62 seq35095 199 1e-48 seq94466 138 3e-30 seq52141 136 1e-29 >seq5275 Length=552 Score = 282 bits (312), Expect = 1e-73 Identities = 165/171 (96%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1 CTCCCACTGCTTGTACGCATACGGTTTCAGGTTCTATTTCACTCCCCTCTCCGGGGTTCT 60 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 61 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGG 120 Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 121 AGGATGGTCCCCCCATATTCAGACAGGGTTTCTCGTGCCCCGTCCTACTCG 171 >seq7670 Length=301 Score = 264 bits (292), Expect = 3e-68 Identities = 198/221 (90%), Gaps = 11/221 (5%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||||||||||| ||||| || || ||||| |||||| ||| |||||||||||||||| | Sbjct 92 TCCGATCCACAAGTCATCCC-CTGCCTTTT-CAACGGAAGTGGGTTCGGTCCTCCAGTCA 149 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 || |||||| | |||||||||| ||| |||||||||||||||||| |||||||||| Sbjct 150 GT-GTTACCTAC---TTCAACCTGCTCAT-GGATAGATCGCCCGGTTT-CGGGTCTATT- 202 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 203 CCCAGCGACTAGACGCCCTATTAAGACTCGCTTT-CGCTACGCCTCCCCTATTCGGTTAA 261 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAA 223 ||| |||||||||||||||||||||||||||||||||||| Sbjct 262 GCTC-GCCACTGAAAATAAGTCGCTGACCCATTATACAAAA 301 >seq7671 Length=245 Score = 260 bits (288), Expect = 3e-67 Identities = 197/221 (89%), Gaps = 12/221 (5%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||||||||||| ||||| || || ||||| |||||| ||| |||||||||||||||| | Sbjct 37 TCCGATCCACAAGTCATCCC-CTGCCTTTT-CAACGGAAGTGGGTTCGGTCCTCCAGTCA 94 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 || |||||| | ||||||||| ||| |||||||||||||||||| |||||||||| Sbjct 95 GT-GTTACCTAC----TCAACCTGCTCAT-GGATAGATCGCCCGGTTT-CGGGTCTATT- 146 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 147 CCCAGCGACTAGACGCCCTATTAAGACTCGCTTT-CGCTACGCCTCCCCTATTCGGTTAA 205 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAA 223 ||| |||||||||||||||||||||||||||||||||||| Sbjct 206 GCTC-GCCACTGAAAATAAGTCGCTGACCCATTATACAAAA 245 >seq59592 Length=613 Score = 242 bits (268), Expect = 9e-62 Identities = 298/394 (76%), Gaps = 11/394 (3%) Strand=Plus/Plus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| || ||||||| |||||||| || |||||| ||||| || |||| | Sbjct 60 TTTTCAACGTGCGTGGGTTCGGACCTCCAGTACGT-GTTACCGTACCTT-CATCCTGGAC 117 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA--GACGCCCTAGTAAG 147 | || |||||| |||||||| |||||||| ||| | |||| | ||||||| | || Sbjct 118 AGGGG-TAGATCACCCGGTTT-CGGGTCTACGTCCACGT-ACTAATGTCGCCCTATTCAG 174 Query 148 ACTCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||||||||| |||| || |||| || || | | | |||| ||| ||| |||| Sbjct 175 ACTCGCTTT-CGCTGCGGCTCCGGCTTCTCACCTTAACCTTGCACGGGAACGTAACTCGC 233 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | |||| ||||||||| |||| ||||||| || |||||| ||| ||||| | Sbjct 234 CGGTTCATTCTACAAAAGGCACGCCATCACCCATTAATC-GGGCTCTGACTTTTTGTAAG 292 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 || ||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||| Sbjct 293 CACACGGTTTCAGGTTCTATTTCACTCCCCT-TCCGGGGTCCTTTTCACCTTTCCCTCAC 351 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATA 386 |||||| ||||||||||||| | | ||||||||||||| |||||||| || | Sbjct 352 GGTACTGCTTCACTATCGGTCGCTAGGGAGTATTTAGCCTTACCAGATGGTCCTGGCAGA 411 Query 387 TTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||| || ||||| ||||| ||| ||||||| Sbjct 412 TTCATACGGGGTTTCACGTGCCCCGCACTACTCG 445 >seq35095 Length=430 Score = 199 bits (220), Expect = 1e-48 Identities = 219/279 (78%), Gaps = 13/279 (5%) Strand=Plus/Minus Query 146 AGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAA--TAAG 202 ||||||||||| |||| ||||| | ||||| | ||||||| || ||||| |||| Sbjct 429 AGACTCGCTTT-CGCTGCGCCTACACCTATCGGCTTAAGCTC-GCT--TGAAACATTAAG 374 Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTG 262 || | |||||||||| ||| |||||||| |||| | ||| | |||| |||||||| Sbjct 373 TCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACC-CTCCAACTGCTTG 315 Query 263 TACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCC 322 || ||| | |||||||| || ||||||||||||| |||||| |||||| |||||||| Sbjct 314 TAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCC 255 Query 323 TCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCC 382 ||||||||||||||| ||||||||| | ||||||||| |||||||| |||| ||| Sbjct 254 TCACGGTACTAGTTCGCTATCGGTCGCATACGAGTATTTAGGCTTGGAGGGTGGT--CCC 197 Query 383 CAT-ATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||| |||||||| |||| ||||| ||| |||||||| Sbjct 196 CATCGTTCAGACAGGATTTCACGTGC-CCG-CCTACTCG 160 >seq94466 Length=294 Score = 138 bits (152), Expect = 3e-30 Identities = 135/174 (78%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||| || |||||| || | ||||||||| |||||||||| || || || ||| Sbjct 6 GGGCTCCGACCGCTTGTGGGCGTCTGGTTTCAGGTTCTATTTCACCCCGCTACTCGCGGT 65 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 |||||| || |||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 66 ACTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 125 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 126 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 179 >seq52141 Length=225 Score = 136 bits (150), Expect = 1e-29 Identities = 160/207 (77%), Gaps = 11/207 (5%) Strand=Plus/Minus Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69 |||| |||| || ||| |||| |||||| ||| ||||||| |||||||| |||| | Sbjct 196 CACACCTCATCCC-CTACCTTTG-CAACGGGAGTGGGTTCGGGCCTCCAGTCAGTACCTG 139 Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129 ||||| || |||| ||| | |||||| |||||||| |||||| | ||| ||| Sbjct 138 G---ACCTTCCACCCTGGGCAT-GACTAGATCACCCGGTTTC--GGTCTACTGCCC-GCG 86 Query 130 ACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGC 189 |||| |||||| | ||||||| ||| | || |||||||||||| ||||||||| |||| Sbjct 85 ACTATGCGCCCTTATCAGACTCGGTTTCC-CTTCGCCTCCCCTATACGGTTAAGC-TTGC 28 Query 190 CACTGAAAATAAGTCGCTGACCCATTA 216 ||| | | |||||||||||||||||| Sbjct 27 CACGAACAGTAAGTCGCTGACCCATTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239982195200