Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq23716 116 1e-23 seq60735 111 5e-22 >seq23716 Length=3157 Score = 116 bits (128), Expect = 1e-23 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 82 CGCGTTGTTGACGAAGTTCTGCTCCGTGAGGACGGCCATCTGACTTAGATAATTTAAGGA 141 |||| | |||||||||||||| | ||| || ||||||| || | || | | || Sbjct 1294 CGCGGCGCTGACGAAGTTCTGCACGCCCAGGCCGACCATCTGGCTGAAGTAGCTCAGCGA 1235 Query 142 CGCCTCACCGCTGTTGTTCTGCCAGTTGGTATTGGTCATGAAACTGACGGCGGTATTAAA 201 || || ||||||| | |||||||||||| ||||| | ||| |||| |||||| || | Sbjct 1234 GGCTTCGCCGCTGTAGGCCTGCCAGTTGGTGTTGGTGACGAAGCTGATGGCGGTGTTCAG 1175 Query 202 CGCCTAGGTCCATTCCTGGCCCGGCAGGTTTTGCGGGTTCAGCGGGAGGGAGCCTTGAAA 261 |||| ||||||||| | || ||||||| ||||| || ||||| || ||| || | Sbjct 1174 CGCCAGGGTCCATTCGAGCCCGGGCAGGTGCTGCGGATTGAGCGGCAGTTCGCCCTGCAG 1115 Query 262 TAACAGAATAGAGAACAGCAGCAGGAAGCCGGCGAGGTTGAA 303 | ||| || | ||||||||| | || || |||||||| Sbjct 1114 CAGCAGGATGGCGAACAGCAGGATGATCCCCAGCAGGTTGAA 1073 >seq60735 Length=435 Score = 111 bits (122), Expect = 5e-22 Identities = 186/263 (71%), Gaps = 7/263 (3%) Strand=Plus/Minus Query 300 TGAATGCGAGCAAGGCCAGCATGTACTTCTGCCAGCTTTGTTCCTGCTGTGCGTCCACAC 359 |||| || |||| ||||| |||| ||| |||| || || ||| | ||| || | Sbjct 367 TGAAGGCCAGCAGCGCCAGGCTGTAGGTCTTCCAGTCCTGATCACGCTCGGAGTCGACCC 308 Query 360 CCGACAGGCGATA--ACAGGCGCTTTCCACCGGCCCCAGCACCGGGCTGAGCCAGGTGCG 417 | || | |||||| ||||||||| | |||||| |||||||| || ||| | | | Sbjct 307 CGGATATGCGATAGCACAGGCGCT--CAACCGGCAAAAGCACCGGACTCAGCAGGTTAGG 250 Query 418 CTGGCCCTCCATCACCTTGTAGTAGAACCGCCCCAGG-AACGGAGTCGGCACCAGTACCA 476 || || ||||| || || || |||||||||||||| ||||| | |||| | || |||| Sbjct 249 CTTACCTTCCATGACGCTGAAGAAGAACCGCCCCAGGAAACGGCGCCGGCGCGAGCACCA 190 Query 477 CGGCAAAGAAGGCGATGATCAGCCAATAGTCAT-AACTGTGCATAGCCGCTCCTAGTTCC 535 | |||||||| | ||||||||||| || | ||| ||||| ||||||| | Sbjct 189 GCACGAAGAAGGCCAGAATCAGCCAATAATCTTGGACT-TGCATGTTGCCTCCTAGCCGC 131 Query 536 GATCCGCGCGTAACAGCGCAACC 558 || | ||||| | |||||| ||| Sbjct 130 GACCGGCGCGCAGCAGCGCCACC 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1690594281600