Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq991 257 3e-66 seq46765 253 4e-65 seq80910 187 5e-45 seq67490 187 5e-45 seq129326 161 2e-37 seq67489 96.9 7e-18 >seq991 Length=11960 Score = 257 bits (284), Expect = 3e-66 Identities = 239/302 (79%), Gaps = 1/302 (0%) Strand=Plus/Minus Query 1 CGACTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 60 || |||||||||| | | || |||| ||||| ||||||||| | | || || ||||| Sbjct 2537 CGCCTTGAGCTTGTTGCCGACGGGCAGCAACAGCAGGTTGGCGAAGCCGACACCATAGAT 2478 Query 61 GGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCC 120 ||||| || || |||||||| |||||||||||||||||||| || ||||| || || Sbjct 2477 CGTGGCCACGAAGGCCACGGCGATGCCGCTGCCCAGTTGCGAGGGATCGGCAAGATTCTG 2418 Query 121 CATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 180 ||| ||||||||||||||||||||||| ||||||||||| | || ||||| |||||||| Sbjct 2417 CATGACGTGGATCAGGCCCATCACCGCGCCGATGATGCCCACCGTGGGCGCATAGCCGCC 2358 Query 181 CATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCA 240 |||| ||| |||| ||||||||| ||| |||||| ||||| || ||||| |||| Sbjct 2357 CATGGCCTCATAGACCTTGGCGGCGGCGATGTCGCGGTCTTCCT-GGCCGTAGAGGTCCA 2299 Query 241 CTTCCCGAAGTCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTT 300 | || | | ||||| | ||||| ||||||| ||| ||||||||||| |||||||| | Sbjct 2298 CCTCGAGGATGCTGCGCAGGGCTTCGGGCTCGGTGCCATCCACCAGCAGCTGCAGGCCCT 2239 Query 301 TG 302 || Sbjct 2238 TG 2237 >seq46765 Length=394 Score = 253 bits (280), Expect = 4e-65 Identities = 235/294 (80%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 1 CGACTTGAGCTTGCTCGCC-ACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGA 59 || |||||||||| |||| | |||| | || ||||||||| | |||||||||||| Sbjct 103 CGCCTTGAGCTTGG-CGCCGATGGGCAGTAGCAACAGGTTGGCGAAGCCCACGCCGTAGA 161 Query 60 TGGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGC 119 |||||||||| || |||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 162 TGGTGGCGACGAAGGCCACGGCGATGCCGCTGCCCAGCTGCGAGGGATCGGCCAGGTTCT 221 Query 120 CCATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGC 179 ||| ||||||||||| ||||| ||||||||||||||||||||||| |||| ||||| | Sbjct 222 GCATGACGTGGATCAGCCCCATGACCGCACCGATGATGCCGATGGTGGGCGAATAGCCAC 281 Query 180 CCATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCC 239 ||||| || ||||| |||||||| || ||||| |||| || ||||| |||| Sbjct 282 CCATGGCCTCGAAGACCTTGGCGGCCGCGAGGTCGCGATCCTCCT-GGCCGTAGAGATCC 340 Query 240 ACTTCCCGAAGTCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGC 293 || ||| | | ||||| | ||||||||||||| |||||||||||||| |||| Sbjct 341 ACCTCCAGGATGCTGCGCAGGGCTTCCGGCTCGGTGCCGTCCACCAGCAATTGC 394 >seq80910 Length=683 Score = 187 bits (206), Expect = 5e-45 Identities = 229/309 (74%), Gaps = 3/309 (1%) Strand=Plus/Minus Query 1 CGACTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 60 || |||||||||| ||||| ||||| || | ||||||||| ||| | ||||||||| Sbjct 557 CGCCTTGAGCTTGGCCGCCATCGGCAGGAAGAACAGGTTGGCCGAGGCGATGCCGTAGAT 498 Query 61 GGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCC 120 ||||||| || ||| |||| |||||| ||| || | || || ||| | ||||| Sbjct 497 GGTGGCGGTGAATGCCGCGGCGATGCCGTGGCCGAGCTTGGACGGATCGCCCAGGTTCTT 438 Query 121 CATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 180 |||||| ||||||||| | |||||| ||||||||||| | ||||||||| ||| ||| Sbjct 437 CATCACCGCGATCAGGCCGAACACCGCGCCGATGATGCCCAGGGTCGGCGCATAGATGCC 378 Query 181 CATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCA 240 ||||| || ||||| ||||| ||| | |||| || |||| || | | || | Sbjct 377 CATGCCCTCGAAGACCTTGGCCGCGGCCAGATCGTGGTGCTCCT-GGCCTTCCAGGTCGA 319 Query 241 CTTCCCGAAGTCTG-CGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCT 299 ||| | | | || || || ||||||||||| ||||||||||||||| |||||||| Sbjct 318 TCTCCAGCA-TGTGCCGGATGGCTTCCGGCTCCACGCCGTCCACCAGCATCTGCAGGCCC 260 Query 300 TTGCGCGCG 308 |||||| || Sbjct 259 TTGCGCACG 251 >seq67490 Length=683 Score = 187 bits (206), Expect = 5e-45 Identities = 229/309 (74%), Gaps = 3/309 (1%) Strand=Plus/Plus Query 1 CGACTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 60 || |||||||||| ||||| ||||| || | ||||||||| ||| | ||||||||| Sbjct 127 CGCCTTGAGCTTGGCCGCCATCGGCAGGAAGAACAGGTTGGCCGAGGCGATGCCGTAGAT 186 Query 61 GGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCC 120 ||||||| || ||| |||| |||||| ||| || | || || ||| | ||||| Sbjct 187 GGTGGCGGTGAATGCCGCGGCGATGCCGTGGCCGAGCTTGGACGGATCGCCCAGGTTCTT 246 Query 121 CATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 180 |||||| ||||||||| | |||||| ||||||||||| | ||||||||| ||| ||| Sbjct 247 CATCACCGCGATCAGGCCGAACACCGCGCCGATGATGCCCAGGGTCGGCGCATAGATGCC 306 Query 181 CATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCA 240 ||||| || ||||| ||||| ||| | |||| || |||| || | | || | Sbjct 307 CATGCCCTCGAAGACCTTGGCCGCGGCCAGATCGTGGTGCTCCT-GGCCTTCCAGGTCGA 365 Query 241 CTTCCCGAAGTCTG-CGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCT 299 ||| | | | || || || ||||||||||| ||||||||||||||| |||||||| Sbjct 366 TCTCCAGCA-TGTGCCGGATGGCTTCCGGCTCCACGCCGTCCACCAGCATCTGCAGGCCC 424 Query 300 TTGCGCGCG 308 |||||| || Sbjct 425 TTGCGCACG 433 >seq129326 Length=343 Score = 161 bits (178), Expect = 2e-37 Identities = 133/162 (82%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 1 CGACTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 60 ||| || |||||| | | | ||||| || || ||||||||| ||||||| |||||||| Sbjct 162 CGATTTCAGCTTGTTGCCGATCGGCAGCAGCAGCAGGTTGGCGATGGCCACACCGTAGAT 103 Query 61 GGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCC 120 |||||| || ||||||||||| |||||||| |||| | |||||||| || ||||| Sbjct 102 GGTGGCAACGAACGCCACGGCGATGCCGCTACCCAAGAGGCTGGGGTCGGCCAGATTGCC 43 Query 121 CATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGAT 162 |||||||||||||| |||||| ||||| |||||||||||||| Sbjct 42 CATCACGTGGATCAAGCCCATGACCGCGCCGATGATGCCGAT 1 >seq67489 Length=464 Score = 96.9 bits (106), Expect = 7e-18 Identities = 124/162 (77%), Gaps = 7/162 (4%) Strand=Plus/Plus Query 4 CTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACT-GGCCACGCCGTAGATGG 62 |||||||||| |||| ||||| |||| ||||||||| | ||| | ||||||||||| Sbjct 294 CTTGAGCTTGGCGGCCATCGGCAGGAACAACAGGTTGGCCCAAGGCGATGCCGTAGATGG 353 Query 63 TGGCGACAAACGCCACGGCAATGCCGCTGCCCAG-TTGCGAAGGGTCGG-CGAGGTTGCC 120 ||||| || || |||| |||||| ||| || |||| ||||||| | ||||| Sbjct 354 TGGCGGTGAAGGCGGCGGCGATGCCGTGGCCGAGCTTGC-TCGGGTCGGCCCAGGTTCTT 412 Query 121 CATCA-CGTGGAT-CAGGCCCATCA-CCGCACCGATGATGCC 159 ||||| || ||| |||||||| || |||| ||||||||||| Sbjct 413 CATCACCGCCGATCCAGGCCCAGCACCCGCGCCGATGATGCC 454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987511593600