Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq39191 255 1e-65 seq4371 203 6e-50 seq6010 192 1e-46 seq52554 141 2e-31 seq44237 123 5e-26 seq6009 111 3e-22 >seq39191 Length=1123 Score = 255 bits (282), Expect = 1e-65 Identities = 241/308 (78%), Gaps = 17/308 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| |||||| ||||||||||||||||||||| Sbjct 73 GGCATTGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 132 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 133 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAGGAT 192 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 |||||||||||| ||| |||| | |||||||||||||||| |||| || |||| || Sbjct 193 CGTCGGCTTGGTAGGCCATTACCCCACCAACTACCTAATCCTACGCGGGCTCATCCCTCG 252 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 ||||||||||||||||| ||| |||||||| ||||||||| Sbjct 253 GCGATAAATCTTTGGTC--CGAA--------------GACATTATAAGGTATTAGCTCAA 296 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||| || | || ||||| || | |||| ||||| ||||||| ||| Sbjct 297 GTTTCCAACTGTTATCCCGAACCAAAGGGCAGATT-CCCACGCGTTACGCACCCGTGCGC 355 Query 301 CACTAAGC 308 ||||| || Sbjct 356 CACTATGC 363 >seq4371 Length=734 Score = 203 bits (224), Expect = 6e-50 Identities = 229/304 (75%), Gaps = 2/304 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||| || | ||||||| |||||| || ||| ||||||||||||| Sbjct 333 GGCATGGCTGGTTCAGGCTTCCGCCCATTGACCAATATTCCTTACT-CTGCCTCCCGTAG 391 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | ||| |||||||| | ||| || Sbjct 392 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGG-GGGTCATCCTCTCAGATCCCCTAAACAT 450 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| || ||| || |||||||| ||||| |||| |||||||||| Sbjct 451 CGTCGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATGTTCCGCATGCCCATCTTTAC 510 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 | |||||| |||| ||||| |||||||||| ||| | ||||||||| ||| | Sbjct 511 CCTATAAATATTTGATCAAATTATGATGCCATAATCTAATTTTATGCGGTGTTAATCTCT 570 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||| | | | ||| || || ||||| ||||| | ||||||||| ||||||| ||| Sbjct 571 CTTTCGAGAGGCTATCCCCCTGATAAAGGTAGGTTACATACGTGTTACGCACCCGTGCGC 630 Query 301 CACT 304 |||| Sbjct 631 CACT 634 >seq6010 Length=1125 Score = 192 bits (212), Expect = 1e-46 Identities = 232/312 (74%), Gaps = 19/312 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 1031 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 972 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||| | | ||| |||||||| || | ||| ||| Sbjct 971 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGAT 912 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| ||| | |||||||| |||||| | | || ||||| | Sbjct 911 CGTCGCCTTGGTAGGCCTTTACCCTACCAACTAGCTAATCCGACCTAGGCTCATCTAATA 852 Query 181 GCGATAAATCTTTGGTCAAAGAATGAT--GCCATCCTCTGACAT------TATGCGGTAT 232 ||| | |||| ||| ||| ||| ||| | | |||||||||| Sbjct 851 GCG-------TGAGGTC--CGAA-GATCCCCCACTTTCTCCCGTAGGACGTATGCGGTAT 802 Query 233 TAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCAC 292 |||||||| |||| ||||||| | || | || |||||| || || | | |||||||| Sbjct 801 TAGCGTTCCTTTCGAAACGTTGTCCCCCACTACTAGGCAGATTCCT-AGGCATTACTCAC 743 Query 293 CCGTCCGCCACT 304 ||||||||| || Sbjct 742 CCGTCCGCCGCT 731 >seq52554 Length=343 Score = 141 bits (156), Expect = 2e-31 Identities = 177/243 (73%), Gaps = 16/243 (7%) Strand=Plus/Plus Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135 |||||||||| |||||||| ||| |||||||| ||||||| ||||||| ||||||| | Sbjct 1 CTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAG 60 Query 136 CTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAAT------ 189 | ||| | ||||||||| ||||| ||||| ||||||| ||||| || | || Sbjct 61 CCGTTACCCCACCAACTAGCTAATGCGCCGCAGGCCCATCCTTCAGTGACAGATTGCTCC 120 Query 190 --CTTTGGTCAAAGAATGATGCCATCCTCT---GACATTATGCGGTATTAGCGTTCGTTT 244 |||| || | | |||| | || | ||| |||||||||| ||||| Sbjct 121 GTCTTTCGTTC-----TTCTCCCATGCAGAAAAGAAAGTATCCGGTATTAGCTACCGTTT 175 Query 245 CCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||||| ||| || || |||||||||| |||||||||||||||||||||| || Sbjct 176 CCGGTAGTTATCCCAGGCTAAAGGGCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCT 235 Query 305 AAG 307 ||| Sbjct 236 AAG 238 >seq44237 Length=356 Score = 123 bits (136), Expect = 5e-26 Identities = 81/88 (92%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||| Sbjct 87 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCC-ACTGCTGCCTCCCGTAG 29 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATG 88 |||||||| |||||||||||| ||| || Sbjct 28 GAGTCTGGACCGTGTCTCAGTTCCAGTG 1 >seq6009 Length=607 Score = 111 bits (122), Expect = 3e-22 Identities = 86/100 (86%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| |||||| ||||||||||||||||||||| Sbjct 103 GGCATGGCTGGATCAGGCTT-CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 45 Query 61 GAGTCTGG-GCCGTGTCTCAGTCCCAATGTGGCCGTTCAA 99 |||||||| |||||||||||| ||| |||||| | |||| Sbjct 44 GAGTCTGGATCCGTGTCTCAGTTCCAGTGTGGCTGGTCAA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997099084800