Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001435.1 Length=587 Score E Sequences producing significant alignments: (Bits) Value seq12052 398 3e-108 seq90317 149 2e-33 >seq12052 Length=8510 Score = 398 bits (440), Expect = 3e-108 Identities = 356/444 (80%), Gaps = 2/444 (0%) Strand=Plus/Plus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 || ||||||||||||||||| ||||| || ||||| ||||| ||||||||||||||||| Sbjct 5153 TCCATGTACGGCGGTGGTTTCGCCACCGTGCCGGCCTACCTCGCCGACCTGTTCGGTACC 5212 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 ||||||||||| || ||||||||||||||||| ||||||||||| || || |||||||| Sbjct 5213 CAGATGGTCGGCGCCATCCACGGTCGCCTGCTTACCGCCTGGGCCGCCGCCGGCGTCTTC 5272 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGTTGAACGCGCT 180 || |||||| |||| ||||| ||||| ||||||||| ||||||| ||| | ||||| Sbjct 5273 GGTCCGGTGCTGGTCAACTACCTGCGCGAGTATCAGCTGAGCATGGGCATCCCCCGCGCC 5332 Query 181 GCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGC 240 || || ||||||||| |||||||||| || || |||||||||||||| ||||||||| Sbjct 5333 CAGGTGTACGACATCACCCTGTACATCCTGGCCGGTCTGCTGGTGCTGGGCTTCATCTGC 5392 Query 241 AACCTGCTGGTGCGTCCGGTGGCCGACAAGTACTTCATGACCGACGCCGAACTGGCCGCC 300 |||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||| | Sbjct 5393 AACCTGATGGTGCGTCCGGTGGCCGACAAGCACTTCATGACCGAAGCCGAACTCGCCGTC 5452 Query 301 GAGCAAGCGCTGGGGCATGACAAAGGCGCCGAC-GCCAGCACGTCCCTGGAGTGGAAAGC 359 |||| || || || |||| ||||| | || || || |||||||||| || Sbjct 5453 GAGCGCGCCAATGGCCACGACAGCAACGCCGGCAGCGCCCAGGT-GCTGGAGTGGAGCGC 5511 Query 360 CGCGCCAGGTACTGTGCCATTGGCGATTGCCGCCTGGCTGGTGGTGGGTATTCCGTTGGC 419 || || || ||| |||| || ||||||||||||| ||||| || ||| |||| Sbjct 5512 CGATCCCAAGACCAAGCCGCTGGCCATCGCCGCCTGGCTGGCCGTGGGCATCCCGCTGGC 5571 Query 420 GTGGGGTGTGTGGGTGACCCTGCA 443 ||||| | ||| | |||||||| Sbjct 5572 CTGGGGCATCTGGATCACCCTGCA 5595 >seq90317 Length=437 Score = 149 bits (164), Expect = 2e-33 Identities = 131/162 (81%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||||||||| || || |||||||| || || ||||| |||||||||||| | ||| Sbjct 183 TCGATGTACGGCGGCGGCTTCGCCACGGTGCCTGCCTACCTCGCCGACCTGTTC-GCACG 125 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 ||| | || || || |||||||| |||||||| | ||||||||| | || ||| || || Sbjct 124 CAGTTCGTGGGCGCCATCCACGGCCGCCTGCTCATCGCCTGGGCCACCGCCGGCATCCTG 65 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGC 162 |||||||| |||||||||| |||| ||||| ||| || || Sbjct 64 GGCCCGGTCGTGGTGAACTACATGCGCGAGTACCAGCTGGGC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1773685872000