Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq3395 378 2e-102 seq106726 183 7e-44 seq63483 172 1e-40 seq37729 161 2e-37 seq76776 120 7e-25 >seq3395 Length=7566 Score = 378 bits (418), Expect = 2e-102 Identities = 325/397 (82%), Gaps = 4/397 (1%) Strand=Plus/Minus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| || Sbjct 3910 CGACGGCACCGGTCCGGTGTGGAAGGGTACCCTGTTCCCCTTCCTGTTCATCACCATCGC 3851 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTC-CTCGGGCACCACGCCCAAGTTGC 119 ||| |||||||| || || |||||||| |||||| |||||||||||| |||||| || Sbjct 3850 CTGCGGCGCGGTGTCCGGCTTCCATGC-CTGATCCAGCTCGGGCACCACCCCCAAGCTGA 3792 Query 120 TCGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCG 179 |||||| || | ||||||||| |||||||| ||||||| ||||||||||||||| || | Sbjct 3791 TCGCCAAGGAAACCCATGCCCGCTACATCGGCTACGGCGCCATGCTGATGGAGTCCTTTG 3732 Query 180 TGGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGA 239 | ||||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct 3731 TCGCCATCATGGCCATGGTCGCCGCCTCGGTGATCGAGCCGGGCGTCTACTTCGCCATGA 3672 Query 240 ACAGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGC-GCAAACCGTCAGCAGT 298 |||||||||| ||| | |||||| |||||||||| | ||||| || || |||||| Sbjct 3671 ACAGCCCGGCCGCCGTGGTCGGCGCCGACGTGGTGTCGGTGGCCGCCAAGA-TCAGCACC 3613 Query 299 TGGGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAAACC 358 |||||||| | | ||||| ||| |||| |||| ||| | | ||||| || | Sbjct 3612 TGGGGCTTCGTGGTGACGCCCGAGATGCTGCAGGCCACCGCCGCCGAGATCGGCGAGCAC 3553 Query 359 ACCATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395 ||||||||||| |||||||| || |||||||| |||| Sbjct 3552 ACCATCCTGGCCCGTGCCGGTGGTGCGCCGACCCTGG 3516 >seq106726 Length=475 Score = 183 bits (202), Expect = 7e-44 Identities = 286/401 (71%), Gaps = 11/401 (3%) Strand=Plus/Minus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||||||||||||| ||| || |||| |||||||||||||||||||||||||| || Sbjct 470 CGACGGCACCGGCCCGGCGTTCGCCGGCGCGCTGTTCCCGTTCCTGTTCATCACCATCGC 411 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 || |||||||| || |||||||| ||||||||| || ||||||||||||||| || | Sbjct 410 ATGCGGCGCGGTGTCCGGTTTCCACGCGCTGATCGCCAGCGGCACCACGCCCAAGATGAT 351 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 ||| | ||| || | || | |||||| || |||| ||||||| |||| ||||| Sbjct 350 CGCGACCGAGGGCGACCTGCGCTTCATCGGCTATGGCGCGATGCTGACGGAGAGCTTCGT 291 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGC-GTGTACTTCGCCATGA 239 | | | |||||| || | || |||| ||| | || |||||| || || ||||| |||| Sbjct 290 CGGCGTGATGGCGCTGATCGCGGCCTGCGTGCTGGA-CCCGGCAGTCTATTTCGCGATGA 232 Query 240 ACAGCCCGGCTGCCATTGTCGGCAC--CGACGTGGTCACCGTGGCGCAAACCGTCAGCAG 297 || ||| || || | ||||||| || || |||| | ||| || || || Sbjct 231 ACGCCCCCGCCGCGCTGATCGGCACCGCGGCGCAGTCA--GCGGCCAGTGCCATCGCCAA 174 Query 298 TTGGGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCC--GTTGCCCACAATATCGGTGAA 355 ||||||||| | | | || || || || ||| | | |||| | | |||| ||| Sbjct 173 TTGGGGCTTCGTCGTCACCCCCGACATGC--TCGATCAACTCGCCCGCGACGTCGGCGAA 116 Query 356 ACCACCATCCTGGCACGTGCCGG-CGGCGCGCCGACTCTGG 395 || | |||||| | || ||||| ||| || || || |||| Sbjct 115 TCCTCGATCCTGTCGCGCGCCGGCCGGAGCTCCCACGCTGG 75 >seq63483 Length=1454 Score = 172 bits (190), Expect = 1e-40 Identities = 272/387 (70%), Gaps = 2/387 (1%) Strand=Plus/Minus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||||||||||||| ||| || ||| | |||||||| ||||| |||||||| || || Sbjct 833 CGACGGCACCGGCCCGGCGTTCGCGGGTGCGCTGTTCCCCTTCCTCTTCATCACGATCGC 774 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 || |||||||| ||||| ||||| ||||||||| || ||||||||||||||| || | Sbjct 773 GTGCGGCGCGGTGTCGGGCTTCCACGCGCTGATCGCCAGCGGCACCACGCCCAAGATGAT 714 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 ||| | ||| || | || | |||||| ||||||| ||||||| || ||||| Sbjct 713 CGCGACCGAGGGCGACCTGCGCTTCATCGGCTACGGCGCGATGCTGACCGAAAGCTTCGT 654 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGC-GTGTACTTCGCCATGA 239 || | |||||| || | || |||| ||| | || |||||| || || ||||| |||| Sbjct 653 CGCGGTGATGGCGCTGATCGCGGCCTGCGTGCTGGA-CCCGGCAGTCTATTTCGCGATGA 595 Query 240 ACAGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGCAAACCGTCAGCAGTT 299 || ||| || || | |||||||||| | | || || |||| | | || || | Sbjct 594 ACGCCCCCGCCGCGCTGATCGGCACCGATGCCGCCAGCGCGGCGAAGGCGATCGGCGAAT 535 Query 300 GGGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAAACCA 359 ||||||| || ||| ||||||||| | | |||| | | |||| || | Sbjct 534 GGGGCTTCCGGATCCAGCCCGAGGCGCTGACCCAGATCGCCCGCGACGTCGGCGAGGGTA 475 Query 360 CCATCCTGGCACGTGCCGGCGGCGCGC 386 | ||||| || || |||||||||| Sbjct 474 CGATCCTCAGCCGCGCGGGCGGCGCGC 448 >seq37729 Length=2796 Score = 161 bits (178), Expect = 2e-37 Identities = 269/389 (69%), Gaps = 0/389 (0%) Strand=Plus/Minus Query 2 GACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGCC 61 |||||||||||| |||| | || | ||||||||||||||||| ||||| |||||| Sbjct 2591 GACGGCACCGGCCCGGTCTTCTCAGGGGCTCTGTTCCCGTTCCTGTTTATCACTATTGCC 2532 Query 62 TGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTC 121 || || ||| | || || || ||||||||| | ||| || ||||| || || | | Sbjct 2531 TGCGGGGCGATTTCCGGCTTTCATGCGCTGGTTTCCAGCGGAACCACCCCAAAACTCGTG 2472 Query 122 GCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTG 181 | | || ||||| || | || || ||||||| ||| ||||||||||||| || Sbjct 2471 GAGCGGGAAAGCCACATTCGCTTTATTGGCTACGGCGCGATGTTGATGGAGTCGTTTGTC 2412 Query 182 GCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAAC 241 ||||| |||||| || || |||||| ||| | || ||||||||||| || || ||||| Sbjct 2411 GCCATAATGGCGCTGATTTGCGCCTCAGTGCTGGATCCCGGCGTGTATTTTGCAATGAAT 2352 Query 242 AGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGCAAACCGTCAGCAGTTGG 301 |||||| || | | || ||| ||| | | | || || ||| | | ||| Sbjct 2351 GCCCCGGCGGCGCTGATTGGTACCACCGTTGAAAATGCCGCCCAGGTGATCAACGGCTGG 2292 Query 302 GGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAAACCACC 361 ||||||| |||| || ||| | | | |||| | || | || ||| || || Sbjct 2291 GGCTTTGTTGTTACACCGGAGATGTTAAGTGGAATTGCACGGGATGTAGGGGAAGCCTCC 2232 Query 362 ATCCTGGCACGTGCCGGCGGCGCGCCGAC 390 || ||| | ||||| |||||||| ||||| Sbjct 2231 ATTCTGTCCCGTGCTGGCGGCGCACCGAC 2203 >seq76776 Length=392 Score = 120 bits (132), Expect = 7e-25 Identities = 133/176 (76%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 74 TCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTCGCCAGTGAGAGC 133 || || ||||| || || |||||||||||||| ||||| ||| |||| |||| |||||| Sbjct 4 TCCGGCTTCCACGC-CTCATCTCCTCGGGCACGACGCCGAAGATGCTGGCCAAGGAGAGC 62 Query 134 CATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTGGCCATCATGGCG 193 || | ||| |||| |||||||||||||| |||||||||||||| |||||| ||| Sbjct 63 CACGTCCGCATGGTCGGCTACGGCGGCATGCTCATGGAGTCGTTCGTCGCCATCTCCGCG 122 Query 194 ATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAACAGCCCGGC 249 | | || |||| || || || | ||| | |||| ||| ||||| |||||| Sbjct 123 CTCATCGCGGCCTGCGTCATCGACCAGGGCCTCTACTACGCGGTGAACTCCCCGGC 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1160086435200