Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq26888 219 9e-55 seq22254 129 1e-27 seq94153 95.1 3e-17 seq12186 91.5 3e-16 >seq26888 Length=1454 Score = 219 bits (242), Expect = 9e-55 Identities = 261/353 (74%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 3 AAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATAC 62 || || ||| |||| |||||||| |||||||| ||||| || || || |||||||||||| Sbjct 878 AACTTTGGCTCCTGACGCAGCGCAGGCAGGATATTCACATTGGGTGAGGCCTTGGAATAC 819 Query 63 ATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCA 122 || ||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct 818 ATATAGCAGGCGTAACCGCTGCAGTAGCCGCAGAAGTTGCACGGTCCCATCTGCGCGCCA 759 Query 123 TAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACCG 182 |||| |||||| || || || |||||||| ||||| ||||| | ||| || | || || Sbjct 758 TAGGTGTTGGTATAAGGACCTGAGGTATTCGCCGAGGGCAGATCGTAAGGATGATAGCCT 699 Query 183 AC---CTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCC 239 || |||||| ||| | |||||||||||| || |||| || |||| | Sbjct 698 ACTGACTCGGC---GGCCTGGGCAAACAGCTGTGCTGACCAGGTGCGCTTTTGCGCGGGC 642 Query 240 AAGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACC 299 || || || || ||||| || || ||| ||||||| || || ||| ||| || Sbjct 641 AACGGAAAGTTGTCAGAGCGATCGGGCGCAAACGGGTTACCGCCTTTGTCTTTGCCGACA 582 Query 300 AACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGC 352 | || || | | ||||||| ||||||||||| || |||||||| || Sbjct 581 ACCTTACCCTGAATACTCCAGGCACTACCGGAGGTGCCAAACACTTTTTCTGC 529 >seq22254 Length=304 Score = 129 bits (142), Expect = 1e-27 Identities = 131/168 (78%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 192 GCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCAAGGGGAACGGG 251 ||||| |||| |||||||| || ||||||||||| || |||| || ||||| | Sbjct 292 GCGGCCTTCTCGAACAGCTGCGCCGAGACGGTGTTCTT-TGCGCCGGCAGCGGGAA-ATG 235 Query 252 TTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCAACTGGCCTTTG 311 ||||||| ||||| ||||| || |||||||| || |||||||||| |||||| ||| Sbjct 234 CTGGAGCGATCCGGCGCATAGGGATTGCCACCCTTGCCGTCGCCCACCACCTGGCCCTTG 175 Query 312 ACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359 | | |||||||| ||| |||||||| ||||| ||||||||| | ||| Sbjct 174 ATGCTCCAGGCCGTGCCCGAGGTGCCAAAGACCTTTTCCGCGAAATCG 127 >seq94153 Length=799 Score = 95.1 bits (104), Expect = 3e-17 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 ||||| |||| |||| ||||||||||||||||| | |||||||| |||||||||| Sbjct 718 CGAAGCGCGGCTCCTGCTTGAGCGCCGGCAGGATGTTGAGATTCGGCGAGGCCTTGGAAT 659 Query 61 ACATGTAGCACACGTAACCGCTGCA 85 |||||||||| ||||| |||||||| Sbjct 658 ACATGTAGCAGACGTAGCCGCTGCA 634 >seq12186 Length=2634 Score = 91.5 bits (100), Expect = 3e-16 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 ||||| |||| |||| ||||||||||||||||| | |||||||| |||||||||| Sbjct 83 CGAAGCGCGGCTCCTGCTTGAGCGCCGGCAGGATGTTGAGATTCGGCGAGGCCTTGGAAT 24 Query 61 ACATGTAGCACACGTAACCGCTG 83 |||||||||| ||||| |||||| Sbjct 23 ACATGTAGCAGACGTAGCCGCTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045036540800