Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001569.1 Length=509 Score E Sequences producing significant alignments: (Bits) Value seq7262 232 2e-58 seq103195 178 4e-42 >seq7262 Length=2984 Score = 232 bits (256), Expect = 2e-58 Identities = 311/431 (72%), Gaps = 9/431 (2%) Strand=Plus/Minus Query 1 CGACGGTCGTCCGTCGCCGACCCTGGGCTCGCGTGGCGGCCTGTACCCGGAGACCGCACT 60 ||||||||| | || ||||| ||| | |||||||| || || || || ||| | Sbjct 2443 CGACGGTCGCTCCTCCTTTACCCTCGGCACCCGTGGCGGTCTCTATCCCGACACCAGCGT 2384 Query 61 GATTTCGGTGACCGGCCAGGATGTGCTGCCCAAGTTGCAGGCCCAGGCTGAAGCTGCTGT 120 | | |||| |||||| ||| | |||||| |||||||| | || || || || Sbjct 2383 GGTGGTGGTGCAGACCCAGGACGTGATTCCCAAGCTGCAGGCCGAAGCCGAGAAGGCGGT 2324 Query 121 GCGTTTGTTGGGCTTTACGCCGAC---CAACTCG---CCAGGCGTACCACAACTGACCGT 174 || | ||||||| || ||| | ||| | || |||| || || |||||| | Sbjct 2323 CCGCCAGATGGGCTTCACCCCGTCGCCCAATGCCGGCCCCGGCGCGCCCCAGCTGACCCT 2264 Query 175 GACCCTGGCCGAGCTTAAATACCAGTCGCCCAAAGACGGCCTGTATGTGACCGAGGCTTC 234 ||||||||||||||| || |||||||||||||| || ||||| || |||| | Sbjct 2263 GACCCTGGCCGAGCTGAACTACCAGTCGCCCAAGGAG---CTGTACGTCACCGCCTCCGA 2207 Query 235 CATCGGCGCCACCTTCAAGTCTGACGTCAGTGCCGGCACCCGCCGTTACAGTGGCCGCTA 294 | ||| |||||||||| || ||||| | | || ||| | |||| |||||||| Sbjct 2206 CGTCGCCGCCACCTTCCAGGTCGACGTGCGCAACAGCCAGCGCGGCTACAAGGGCCGCTA 2147 Query 295 CGCCGCCTCGCTCAACCAGCGTTTCGGCATGTCGCCCAACCAGGAAACCAACACCAAGCT 354 || |||| || |||||||||||||||||| |||||||| || ||||||||||||| Sbjct 2146 CGGCGCCAGCCTGAACCAGCGTTTCGGCATGGCGCCCAACGCCGAGGCCAACACCAAGCT 2087 Query 355 GGTCAGCGACGTGCTCAGCGATGCCCTGACCCGCCTGTTCAAGGACCCAAGCATCGGCCA 414 ||||||||| ||||| ||||||||||||||||| |||||||||| || | | | | ||| Sbjct 2086 GGTCAGCGATGTGCTGAGCGATGCCCTGACCCGGGTGTTCAAGGATCCGACCGTGGTCCA 2027 Query 415 ACTGCTCAGCG 425 ||||||||| Sbjct 2026 GGTGCTCAGCG 2016 >seq103195 Length=414 Score = 178 bits (196), Expect = 4e-42 Identities = 242/330 (73%), Gaps = 11/330 (3%) Strand=Plus/Plus Query 1 CGACGGTCGTCCGTCGCCGACCCTGGGCTCGCGTGGCGGCCTGTACCCGGAGACC-GCAC 59 ||| || ||||| |||||| || ||| | || ||||||||||| ||||| ||| || | Sbjct 84 CGATGGCCGTCCTTCGCCGGTGCTTGGCACCCGCGGCGGCCTGTATCCGGAAACCAGCTC 143 Query 60 TGATTTCGGTGACCGGCCAGGATGTGCTGCCCAAGTTGCAGGCCCAGGCTGAAGCTGCTG 119 || || | |||| | | |||||||||||| |||| ||| |||| |||||||||| Sbjct 144 C-ATCAGCGTCAGCGGCGATTACGTGCTGCCCAAGCTGCAAGCCGAGGCCGAAGCTGCTG 202 Query 120 TGCGTTTGTTGGGCTTTACGCCGAC---CAACTCG--CCAGGCGTACCACAACTGACCGT 174 ||||| || | ||||| || ||| | |||| | | | ||| || || |||||| | Sbjct 203 TGCGTCTGCTCGGCTTCACCCCGTCGGCCAACGCCTACAACGCG--CCGCAGCTGACCAT 260 Query 175 GACCCTGGCCGAGCTTAAATACCAGTCGCCCAAAGACGGCCTGTATGTGACCGAGGCTTC 234 |||||||| ||||| || || |||||||||||||| || |||| || |||||||| Sbjct 261 CACCCTGGCGGAGCTGAAGTATCAGTCGCCCAAAGAGGGTATGTACGTCACCGAGGCGGA 320 Query 235 CATCGGCGCCACC-TTCAAGTCTGACGTCAGTGCCGGCACCCGCCGTTACAGTGGCCGCT 293 ||| ||| || ||| | | ||||| | |||| |||||| || | ||||| | Sbjct 321 TATCTCGGCCTCCATTCGTG-CCGACGTGCAAGGTGGCAGCCGCCGCTATACCGGCCGTT 379 Query 294 ACGCCGCCTCGCTCAACCAGCGTTTCGGCA 323 ||| ||||||||| |||||||| ||||||| Sbjct 380 ACGGCGCCTCGCTGAACCAGCGCTTCGGCA 409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1524411100800