Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001589.1 Length=431 Score E Sequences producing significant alignments: (Bits) Value seq72662 196 1e-47 seq65217 96.9 9e-18 >seq72662 Length=669 Score = 196 bits (216), Expect = 1e-47 Identities = 225/300 (75%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 119 TTGGGC-TGCGGATTTTCCTGGTGTATGCGCTGTTTATCGGCCTGACCGGCTACTTCGTG 177 |||||| | || || ||||| || || || || |||||||| |||||| |||||| Sbjct 420 TTGGGCGTACGCATCTTCCTCGTCTACTTCCTCTTCGTCGGCCTGGCCGGCTGGTTCGTG 361 Query 178 CTCAACACCGTGATGAAGGAAATCCGCCCCGGCGTGCGCCAATCCACCGAAGAAACATTG 237 || ||| |||||| | || || || |||||||||||||| |||||| ||||| || Sbjct 360 CTATGCACGGTGATGGACGAGATTCGTCCCGGCGTGCGCCAGAGCACCGAGGAAACCCTG 301 Query 238 GTGGACACCGCCAACCTGCTGGCTGAAATCCTGCGTGCAGACGTTAAAAACGGCACCCTC 297 || || ||||||||||||||||| || |||||||| | || || || |||||||||| Sbjct 300 GTCGATACCGCCAACCTGCTGGCCGAGATCCTGCGCGACGAGGTCAAGGCCGGCACCCTC 241 Query 298 GGCCAGAGCCATTGGCCCGAATTGCTCAAGGCTTATGGCAGTCGCCAGCCGGGAGCGACG 357 ||||| ||| || |||| ||| | || |||||| | |||||||| |||| Sbjct 240 GGCCACGGCCGCCTGCACGAAGCGCTGGAAGCCTATGGCCGGCGCCAGCCCCAGGCGAGC 181 Query 358 ATCTGGGGCCTGCCGAAAAACCAGGTCAACCATCGCATCTACGTGA-CCGACGCCAAGGG 416 |||||||| ||| | || | |||||||||| ||||||||||| | |||||| |||||| Sbjct 180 ATCTGGGGGCTGACCAAGGCCGAGGTCAACCACCGCATCTACGTCACCCGACGACAAGGG 121 >seq65217 Length=576 Score = 96.9 bits (106), Expect = 9e-18 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 224 CCGAAGAAACATTGGTGGACACCGCCAACCTGCTGGCTGAAATCCTGCGTGCAGACGTTA 283 |||| ||||| ||||||| || |||||||||||||| ||| | ||||||| ||| | Sbjct 576 CCGAGGAAACCCTGGTGGATACGGCCAACCTGCTGGCCGAACTGCTGCGTGATGACCTGC 517 Query 284 AAAACGGCACCCTCGGCCAGAGCCATTGGCCCGAATTGCTCAAGGCTTATGGCAGTCGCC 343 | ||| ||| | ||||||| |||| ||| || || || |||||| |||| Sbjct 516 GCAGCGGGCGCCTTGAGCAGAGCCGCTGGCAGGAACTGTTCCGCGCCTATGGCCTGCGCC 457 Query 344 AGCCGGGAGCGACGATCTGGGGCCTGCCGAAAAACCAGGTCAACCATCGCATCTACGTGA 403 ||||| ||| |||||||| ||| ||| ||| |||| || |||||||| || | Sbjct 456 AGCCGCAGGCGCAGATCTGGGATGTGCAGAAGAACAGCGTCAGTCACCGCATCTATGTCA 397 Query 404 CCGACGCCAAGGGCAGGGTATTGCTCGA 431 |||| || ||| | || ||||||| Sbjct 396 CCGATGCGGCCGGCCGCGTTCTGCTCGA 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1275136329600