Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq2780 345 1e-92 seq107801 214 4e-53 seq51183 214 4e-53 seq49431 187 6e-45 seq66871 181 2e-43 seq33424 131 4e-28 seq76470 113 1e-22 seq49430 73.4 9e-11 >seq2780 Length=5905 Score = 345 bits (382), Expect = 1e-92 Identities = 315/395 (80%), Gaps = 2/395 (1%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||||||||||| || ||||||||||||||||| |||||||| ||||||||||||| | Sbjct 660 CGATGGTCAGCAGTTCACCGCCCACCTGGGTCCAGGCCAGGCCGGTGACCTGACCGATCT 719 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 ||||||||||||||||||| ||||||| ||| ||||| ||||| || |||||||||||| Sbjct 720 GATCCTGCTGCTCGGCCAGACCGTAGCGGAACTTGCGGACGCCCAGCCAGTGCTCCAGGG 779 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTC-CAGCGCATGTTCCTTGACCGCCTTG 179 ||| | ||||| | | | | || || | ||| || || | ||||||| ||||| Sbjct 780 TGTCCACGGTGACGCTGGCGGT-ACGCTCCTTGCTCAGGGCGTGCTGCTTGACCACCTTG 838 Query 180 CGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAG 239 ||||||| ||| || | ||| |||||||| | ||||| || ||||| |||||||||||| Sbjct 839 CGGCAGACCTTGGCCACCTGACGCTCCAGACTGCGCACGCCCGCTTCACGGGTGTAGTAG 898 Query 240 CGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTG 299 |||| ||||||||| | | | | | || ||||| | |||||||||||||||||| ||| Sbjct 899 CGGATGATGTCGCGCAGGGCGGCTTCATCGAATTCCACCTCGCCCTTCTTCAGGCCGTTG 958 Query 300 GCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTG 359 ||| | ||||||||| ||||| | |||||||||||| ||||||||||||||| Sbjct 959 GCCTTGACCTGCTTGGGAATCAGGTAGCGGGTGGCGATGTTGACCTTCTCGTCTTCGGTA 1018 Query 360 TAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 || || |||| ||||| |||||||| |||||||| Sbjct 1019 TAGCCGGGCAACCGAATGACTTCCATGCGGTCCAG 1053 >seq107801 Length=529 Score = 214 bits (236), Expect = 4e-53 Identities = 186/230 (81%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 165 TCCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCT 224 ||||||||| |||||||||||||||| |||| | |||||| ||| |||||| |||| | Sbjct 327 TCCTTGACCACCTTGCGGCAGATCTTGGCGACTTCGCGCTCGAGGT-ACGCACGCCGGAT 269 Query 225 TCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCC 284 ||||| ||||||||||| |||||||||||||||| | || | | | || | |||| || Sbjct 268 TCGCGCGTGTAGTAGCGCACGATGTCGCGGATCGCGTCGGCGCCGATCTCCAGCTCGTCC 209 Query 285 TTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATC 344 | |||||||||||||||| | |||||||||| | ||||| | |||||||||| | Sbjct 208 TGCTTCAGGCCATTGGCCTTGAGCTGCTTGGGCACCAGGTAGCGCGTCGCGATGTTGAGC 149 Query 345 TTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| |||||||| || || | ||| ||||||||||| |||||||| Sbjct 148 TTCTCGTCCTCGGTGTAGCCGGGGATGCGGATCACTTCCATGCGGTCCAG 99 >seq51183 Length=529 Score = 214 bits (236), Expect = 4e-53 Identities = 186/230 (81%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 165 TCCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCT 224 ||||||||| |||||||||||||||| |||| | |||||| ||| |||||| |||| | Sbjct 327 TCCTTGACCACCTTGCGGCAGATCTTGGCGACTTCGCGCTCGAGGT-ACGCACGCCGGAT 269 Query 225 TCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCC 284 ||||| ||||||||||| |||||||||||||||| | || | | | || | |||| || Sbjct 268 TCGCGCGTGTAGTAGCGCACGATGTCGCGGATCGCGTCGGCGCCGATCTCCAGCTCGTCC 209 Query 285 TTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATC 344 | |||||||||||||||| | |||||||||| | ||||| | |||||||||| | Sbjct 208 TGCTTCAGGCCATTGGCCTTGAGCTGCTTGGGCACCAGGTAGCGCGTCGCGATGTTGAGC 149 Query 345 TTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| |||||||| || || | ||| ||||||||||| |||||||| Sbjct 148 TTCTCGTCCTCGGTGTAGCCGGGGATGCGGATCACTTCCATGCGGTCCAG 99 >seq49431 Length=228 Score = 187 bits (206), Expect = 6e-45 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 166 CCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTT 225 |||||||| |||||||||||||||| |||| | ||||| ||| ||||| |||| || Sbjct 228 CCTTGACCACCTTGCGGCAGATCTTGGCGACTTCACGCTCGAGGTTGCGCACGCCGGATT 169 Query 226 CGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCT 285 |||| ||||||||||| |||| ||||||||||| | || | | | || | ||| ||| Sbjct 168 CGCGCGTGTAGTAGCGCACGACGTCGCGGATCGCGTCGGCACCGATCTCCAGCTCATCCT 109 Query 286 TCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCT 345 |||||||||||||||| | ||||||||| | ||||| ||||||||||| || Sbjct 108 GCTTCAGGCCATTGGCCTTGAGCTGCTTGGGTACCAGGTAGCGCGCGGCGATGTTGAGCT 49 Query 346 TCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCA 393 ||||||| |||||||| || || | || ||||||||||| ||||||| Sbjct 48 TCTCGTCCTCGGTGTAGCCGGGGATACGGATCACTTCCATGCGGTCCA 1 >seq66871 Length=225 Score = 181 bits (200), Expect = 2e-43 Identities = 175/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 166 CCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTT 225 |||||||| |||||||||||||||| |||| | ||||| ||| ||||| |||| | Sbjct 225 CCTTGACCACCTTGCGGCAGATCTTGGCGACTTCACGCTCGAGGTTGCGCACGCCGGACT 166 Query 226 CGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCT 285 |||| ||||||||||| |||||||||||||||| | || | | | || | ||| | Sbjct 165 CGCGCGTGTAGTAGCGCACGATGTCGCGGATCGCGTCGGCGGCGATCTCCAGCTCCTCGC 106 Query 286 TCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCT 345 ||||||||| |||||| | |||||||||| | ||||| |||||||||||| || Sbjct 105 CCTTCAGGCCGTTGGCCTTCAGCTGCTTGGGCACCAGGTAGCGCGTGGCGATGTTGAGCT 46 Query 346 TCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGT 390 ||||||| |||||||| || || | ||| ||||||||||| |||| Sbjct 45 TCTCGTCCTCGGTGTAGCCGGGGATGCGGATCACTTCCATGCGGT 1 >seq33424 Length=1129 Score = 131 bits (144), Expect = 4e-28 Identities = 276/401 (69%), Gaps = 13/401 (3%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||| ||||||| |||||||||||||| |||||||||||| || |||||| |||| | Sbjct 184 CGATCGTCAGCAGCTCGCCGCCCACCTCGGTCCACGCCAGCCCGGTGACCGCGCCGATCT 243 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 ||| || || | |||||||| || | | || || |||| ||| | | |||| Sbjct 244 GATGCTCGGTTTCCGACAGGCCGTGGCGGTACTTCTGCGTGCCGGCGAATTCGTGCAGGT 303 Query 121 AGTCGGCCGTGACCTTCAC-CGAGAAGCGTT--TTTCCAGCGCATGTTCCTTGACCGCCT 177 ||||| ||| ||| |||| | | || || |||| | || | | | ||||| Sbjct 304 TGTCGGGCGTCACCGTCACGCTATCGGCCTTGCCCTCCA--GGATCTGGC-GCAGCGCCT 360 Query 178 TGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGT 237 ||||||| | ||||||||||| ||||||||| |||||| || || ||||||| ||| | Sbjct 361 TGCGGCACAGCTTCGCGATCTCGCGCTCCAGCGTACGCACGCCCGCCTCGCGGG-GTA-T 418 Query 238 AGCGGACGAT-GTCGCGGATCGTGCCGACT---TCAAATTCGATCTCGCCCTTCTTCAGG 293 |||| ||| |||| || || | ||| | || ||||||| |||||| Sbjct 419 AGCGCTGGATCAGCGCGCGCAGTCCCTCATTGGTCAGGGT-GAACTCGCCCGGCTTCAGC 477 Query 294 CCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCT 353 || | ||| | |||||||| |||||| | |||||| | || |||||| | Sbjct 478 CCGTGCGCCTCGACCTGCTTGGCGACGAGGTGCCGCTCGGCGATCTCGACCTTCTCCTGC 537 Query 354 TCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| || ||| || || | ||||||||||| || Sbjct 538 TCGGTGTAGCCTTCCAGCCGGATGATCTCCATCCGGTCGAG 578 >seq76470 Length=334 Score = 113 bits (124), Expect = 1e-22 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 228 CGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTC 287 |||||||||||||||| || |||||| | || || | || | | || | | | Sbjct 334 CGGGTGTAGTAGCGGATGACGTCGCGCACCGCGCTTTCCTCGACCCGCAGTTCCTCGTCC 275 Query 288 TTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTC 347 || | ||| ||| |||||||||||| |||||||||||||||||||| |||| Sbjct 274 TTGACGCCGTTGTTGACCATCTGCTTGGGCAGCAGGTACTTGATGGCGATGTTCGCCTTC 215 Query 348 TCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| ||||| |||| ||||| || ||||||||||||||||| Sbjct 214 TCGTCTTCCGTGTAGCCCGAGAGGCGGATGACTTCCATCCGGTCCAG 168 >seq49430 Length=441 Score = 73.4 bits (80), Expect = 9e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 335 GATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| ||||||||| |||||||| || || | ||| ||||||||||| |||||||| Sbjct 441 GATGTTGAGCTTCTCGTCCTCGGTGTAGCCGGGGATGCGGATCACTTCCATGCGGTCCAG 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156890604800