Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq35038 394 3e-107 seq35037 349 9e-94 seq37047 279 1e-72 seq44446 251 2e-64 seq46833 241 3e-61 seq35039 241 3e-61 seq37758 132 1e-28 seq68567 131 5e-28 seq43296 91.5 4e-16 >seq35038 Length=459 Score = 394 bits (436), Expect = 3e-107 Identities = 312/375 (83%), Gaps = 6/375 (2%) Strand=Plus/Plus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||| |||||||| || ||||| ||||| || || || ||||| || ||||| ||||||| Sbjct 85 CGATGAGGAACACCTCGCGGGCGCCGGCACCCAGCGCGGATTCGCGAATGGCGCGACGCT 144 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | |||||||| |||||||| || |||||||||||||| || || |||||||||||||| | Sbjct 145 CGACCTGGGTCGACTTGCAGGGCACGCAGATCAGCACCCGCGGACTGGGCTGCAGGAAGC 204 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 |||| ||||| ||||||||||||||||| |||| |||||| ||||||||||||||||||| Sbjct 205 TGTTCTCGTGCACCTTGTTGATGAAGTATTGCAACATCTTTTCGCAGACGCTGAAGTCGG 264 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240 |||| ||||| || |||||||| |||||||| | || ||||| || ||||||||||||| Sbjct 265 CGATGACGCCATCCTTCATCGGGCGAATGGCGGAGATGTTGCCGGGCGTACGGCCGAGCA 324 Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTG------ATTACCATGGGTCC 294 |||||||||| ||||| |||||||| || || || ||||| || || ||||| | Sbjct 325 TGCGCTTGGCGTCGGTACCGACGGCGACCACGCTCTTCTGGTTGCTGTTGCCGTGGGTAC 384 Query 295 GAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGG 354 | || || || ||||| ||||| ||||| ||||||||||| ||||| || ||||| |||| Sbjct 385 GGATAGCAACCACCGAGGGCTCGTTCAGCACGATACCGCGTTCGCGGACATAAATGAGGG 444 Query 355 TGTTGGCAGTGCCCA 369 ||||||| || |||| Sbjct 445 TGTTGGCGGTTCCCA 459 >seq35037 Length=752 Score = 349 bits (386), Expect = 9e-94 Identities = 240/267 (90%), Gaps = 3/267 (1%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| Sbjct 489 ATCAGGAACACTTCACGGGCACCGGCGCCCTGCGCCGATTCGCGGATGGCACGACGCTCA 548 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 |||||||| || ||||| || |||||||||||||| || ||||||||||||||||| ||| Sbjct 549 ACCTGGGTCGATTTGCATGGCACGCAGATCAGCACGCGTGGGCTGGGCTGCAGGAAGCTG 608 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 609 TTCTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTTTCGCAGACGCTGAAGTCGGCG 668 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 || || ||||| ||||| || || ||||| || ||||||||||| |||||||| |||||| Sbjct 669 ATGACACCGTCCTTCAT-GGGCGGATGGCGGCGATATTGCCTGG-GTACGGCC-AGCATG 725 Query 243 CGCTTGGCCTCGGTGCCGACGGCAACG 269 ||||||||||| ||||| ||||| ||| Sbjct 726 CGCTTGGCCTCAGTGCCTACGGCCACG 752 >seq37047 Length=1432 Score = 279 bits (308), Expect = 1e-72 Identities = 318/423 (75%), Gaps = 8/423 (2%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 ||||||||||||||||| ||||| || || |||| ||||| ||||| || || ||||| Sbjct 986 ATCAGGAACACTTCACGTGCACCCGCCCCCTGGGCAGATTCGCGGATTGCGCGGCGCTCA 1045 Query 63 ACCTGGGTGG-ACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACT 121 ||||| |||| || || || || || | |||||| || || || || ||| || || Sbjct 1046 ACCTGCGTGGCACCGACA-GGCACACATACCAGCACGCGCGGACTTGGGCGCATAAAGCT 1104 Query 122 GTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGC 181 ||| |||||||| || ||||||| ||||||||| |||||| ||| ||||||||| Sbjct 1105 GTTGCTGTGAACCTGCTTAATGAAGTGCTGCAGCATTTTCTCGGTCACGAAGAAGTCGGC 1164 Query 182 GATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCAT 241 ||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||||| ||||| Sbjct 1165 GATAACGCCATCTTTCATAGGACGAATGGCTGCAATATTGCCCGGTGTACGGCCTAGCAT 1224 Query 242 GCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTC--TGATT----ACCATGGGTCCG 295 | ||||| || || ||||| | |||||||| ||| || || || Sbjct 1225 CTGTTTGGCGTCATGACCAACGGCCGCTACACTTTTAGGTGAGCCGGCACGATCCTGGCG 1284 Query 296 AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGT 355 ||| ||||| || || ||||| ||||| ||||| || | | || ||||| ||||| Sbjct 1285 AATAGCCACTACGGAAGGCTCGTTCAGCACGATGCCTTGTCCTTTTACATAAATCAGGGT 1344 Query 356 GTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAA 415 ||| || || |||||||||||||| | || |||||||||||||||| | ||| || || Sbjct 1345 GTTCGCGGTACCCAGGTCAATGGACAAGTCATTGGAAAACATGCCACGAAATTTTTTAAA 1404 Query 416 CAT 418 ||| Sbjct 1405 CAT 1407 >seq44446 Length=793 Score = 251 bits (278), Expect = 2e-64 Identities = 175/199 (88%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 252 TCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACCGAT 311 ||||| |||||||| ||||| || ||||| || || ||||| || || || || || || Sbjct 791 TCGGTACCGACGGCGACGACGCTCTTCTGGTTGCCGTGGGTACGGATAGCGACCACGGAC 732 Query 312 GGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGG 371 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 731 GGCTCATTCAGGACGATACCGCGCTCGCGCACATAAATAAGGGTATTGGCAGTGCCCAGG 672 Query 372 TCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGGAAAGGACCC 431 || || || |||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 671 TCGATCGACAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATTAGGAAGGGACCC 612 Query 432 TAAGCAACGCGTGGGTAAA 450 || ||||||||||||| || Sbjct 611 TAGGCAACGCGTGGGTGAA 593 >seq46833 Length=642 Score = 241 bits (266), Expect = 3e-61 Identities = 295/399 (74%), Gaps = 14/399 (4%) Strand=Plus/Plus Query 35 GGCCGATTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCACGGAACGCAGATCAG 94 ||||||||| |||| | || ||||||||||||||||| | ||| ||||| | ||| Sbjct 230 GGCCGATTCCTTGATG-CGCGGCGCTCCACCTGGGTGGAACCGGCCGGCACGCACACCAG 288 Query 95 CACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAG 154 ||| || |||||||| ||||||| | | ||| ||||| |||||||| | || ||| Sbjct 289 CACGCGCGGGCTGGGGCGCAGGAAGCGCGACTTGTGCACCTTCTTGATGAAATGCTTCAG 348 Query 155 CATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGC 214 |||| |||| | | ||||||||||||| |||||||| |||||||| || |||| | Sbjct 349 CATCGCCTCGGTGTAGGTGAAGTCGGCGATGACGCCGTCCTTCATCGGGCGGATGGTGGT 408 Query 215 AATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGG----CAACGA 270 || | ||| || || ||||| ||||| ||||||| |||| |||||||| || ||| Sbjct 409 GATGTGGCCCGGGGTGCGGCCCAGCATCTGCTTGGCTTCGGCGCCGACGGCGGCCACCGA 468 Query 271 ---CACTTTTCTGATTACCATGGGTC----CGAATGGCCACAACCGATGGCTCATTCAGG 323 | | | ||| | |||| || | |||||| ||||| ||||| ||||| Sbjct 469 GCGCGCCCCGCCGATGGC--GCGGTCCTGGCGCACGGCCACCACCGACGGCTCGTTCAGC 526 Query 324 ACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGA 383 ||||| || | | |||||||| || ||||||||||| |||||||| || ||||| || Sbjct 527 ACGATGCCCTGTCCACGCACGTAGATGAGGGTGTTGGCCGTGCCCAGATCGATGGACAGG 586 Query 384 TCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGG 422 ||| |||| |||||||| || || ||||||||||| ||| Sbjct 587 TCGTTGGAGAACATGCCGCGAAGCTTCTTGAACATCGGG 625 >seq35039 Length=241 Score = 241 bits (266), Expect = 3e-61 Identities = 166/188 (88%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 ||||||||||||| ||||||||||| ||||| || || ||||| || ||||| ||||||| Sbjct 54 CGATCAGGAACACCTCACGGGCACCCGCGCCCAGCGCGGATTCGCGAATGGCGCGACGCT 113 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | |||||||| |||||||| || |||||||||||||| || || |||||||||||||| | Sbjct 114 CGACCTGGGTCGACTTGCAGGGCACGCAGATCAGCACCCGCGGACTGGGCTGCAGGAAGC 173 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 |||| ||||| ||||||||||||||||| |||| |||||| ||||||||||||||||||| Sbjct 174 TGTTCTCGTGCACCTTGTTGATGAAGTATTGCAACATCTTTTCGCAGACGCTGAAGTCGG 233 Query 181 CGATCACG 188 |||| ||| Sbjct 234 CGATGACG 241 >seq37758 Length=886 Score = 132 bits (146), Expect = 1e-28 Identities = 179/247 (72%), Gaps = 13/247 (5%) Strand=Plus/Plus Query 187 CGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCT 246 ||||||| |||||||| || |||| | || | ||| || || ||||||||||| ||| Sbjct 1 CGCCGTCCTTCATCGGGCGGATGGTGGTGATGTGGCCCGGCGTGCGGCCGAGCATCTGCT 60 Query 247 TGGCCTCGGTGCCGACGGCAACGACA---CTTTT----CTGATTACCATGGGTCC----G 295 ||||||| | ||| || || | || | | | ||| || ||||| | Sbjct 61 TGGCCTCCGCGCCCACCGCGGCCACCGAGCGGGTGCCGCCGATCGCCC--GGTCCTGGCG 118 Query 296 AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGT 355 | ||||| ||||| || || ||||| ||||| || | | |||||||| || ||||| Sbjct 119 CACCGCCACCACCGACGGTTCGTTCAGCACGATGCCCTGGCCACGCACGTAGATGAGGGT 178 Query 356 GTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAA 415 |||||| |||||||| || ||||| || ||| |||| |||||||| || ||||||||||| Sbjct 179 GTTGGCCGTGCCCAGATCGATGGACAGGTCGTTGGAGAACATGCCGCGGAGTTTCTTGAA 238 Query 416 CATGGGG 422 ||| ||| Sbjct 239 CATCGGG 245 >seq68567 Length=478 Score = 131 bits (144), Expect = 5e-28 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||| |||| || ||||| ||||| | ||||||||| ||| || || |||| Sbjct 190 CGATCAGGTACACGTCGCGGGCGCCGGCCTCCTCGGCCGATTCCTTGATCGCGCGGCGCT 131 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 ||||||||||||| | ||| ||||| | |||||| || |||||||| ||||||| | Sbjct 130 CCACCTGGGTGGAACCGGCCGGCACGCACACCAGCACGCGCGGGCTGGGGCGCAGGAAGC 71 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 | ||| ||||| |||||||| | || ||||||| |||| | | ||||||||| Sbjct 70 GCGACTTGTGCACCTTCTTGATGAAATGCTTCAGCATCGCCTCGGTGTAGGTGAAGTCGG 11 Query 181 CGATCACGCC 190 |||| ||||| Sbjct 10 CGATGACGCC 1 >seq43296 Length=1628 Score = 91.5 bits (100), Expect = 4e-16 Identities = 71/84 (85%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 353 GGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTT 412 ||||||||| || |||||||| || || ||||||||||| ||||||||||||| |||||| Sbjct 1 GGTGTTGGCGGTTCCCAGGTCGATCGACAGATCGCTGGAGAACATGCCACGCAATTTCTT 60 Query 413 GAACATGGGGAAAGGACCCTAAGC 436 ||||||| || ||||||| || Sbjct 61 GAACATGAGG---TGACCCTAGGC 81 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1351836259200