Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001702.1 Length=226 Score E Sequences producing significant alignments: (Bits) Value seq22231 228 1e-57 seq60041 140 4e-31 >seq22231 Length=2364 Score = 228 bits (252), Expect = 1e-57 Identities = 187/226 (83%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 1 CGACGATGAAACGGAAAATCCCGTAGAACAACGCGAACATGCCCGACACGGCCATGGTTG 60 |||||||||| ||||| || |||||| | | | |||||| ||| |||||||||||||| | Sbjct 1201 CGACGATGAAGCGGAAGATGCCGTAGCAGAGCACGAACAGGCCGGACACGGCCATGGTCG 1260 Query 61 GGCGTGGCTTGCGCGAGAAGATGTAGAGGATAAGGAACAGCGCCACACCTTCCAACGCAA 120 | || |||||||||||| ||| ||||||| | |||||||||||| ||||||| || | Sbjct 1261 GCCGCGGCTTGCGCGAGTAGAGCCAGAGGATCACGAACAGCGCCAC-CCTTCCAGGGCGA 1319 Query 121 ACTGGTAGAGCTGCGACGGATGGCGCGGCAGTTGTGCCGGGTCGCTGAACGGGGGGAACA 180 |||| ||||||||||| |||||||||||||| || ||||| |||||| | || || || | Sbjct 1320 ACTGATAGAGCTGCGAGGGATGGCGCGGCAGCTGGGCCGGATCGCTGTAGGGCGGAAAGA 1379 Query 181 CCATCGCCCACGGCACATCGGTCGGCTTGCCCCACAACTCGGCGTT 226 ||||||||| ||||| ||||| ||||||||||| | |||||||| Sbjct 1380 TCATCGCCCAGGGCACGTCGGTGGGCTTGCCCCAGAGTTCGGCGTT 1425 >seq60041 Length=704 Score = 140 bits (154), Expect = 4e-31 Identities = 119/143 (83%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 86 GAGGATAAGGAACAGCGCCACACCTTCCAA-CG-CAAACTGGTAGAGCTGCGACGGATGG 143 |||||| | ||||||||| || | ||| || | |||||||| ||||||||||| || Sbjct 227 GAGGATGATGAACAGCGCGACGAC--CCAGGCGACGAACTGGTACAGCTGCGACGGGTGC 170 Query 144 CGCGGCAGTTGTGCCGGGTCGCTGAACGGGGGGAACACCATCGCCCACGGCACATCGGTC 203 || | ||| |||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct 169 CGTGCCAGCTGTGCCGGGTCGCTAAACGGCGGGAAGACCATGGCCCACGGCACGTCGGTC 110 Query 204 GGCTTGCCCCACAACTCGGCGTT 226 ||||||||||| | ||||||||| Sbjct 109 GGCTTGCCCCATAGCTCGGCGTT 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623212336500