Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq19417 325 1e-86 seq33962 158 3e-36 seq30776 84.2 5e-14 seq23505 84.2 5e-14 seq74004 78.8 2e-12 >seq19417 Length=2353 Score = 325 bits (360), Expect = 1e-86 Identities = 261/320 (82%), Gaps = 1/320 (0%) Strand=Plus/Plus Query 3 ACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCTGG 62 ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2035 ACGTTGGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAGGTGCATGATCTTCTGA 2094 Query 63 TCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNNNN 122 ||||||||||| ||||||||||| ||||||| |||||||| ||||||||||| || Sbjct 2095 TCCAGGTGCAGATAGGGGTAGTTGCCGTCCAGCGGCAGCGAGGGCGCCAGCTTGACCACC 2154 Query 123 NNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGCCG 182 |||||| || ||||| |||||||||||||| ||||||| ||| Sbjct 2155 CCACCAGCATCAGCGG-CGCCACCTCGCCGGCGGCGCGGGCCACGGCCAGGATCAGCCCG 2213 Query 183 GTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGGTC 242 ||| |||| ||||| || |||| |||| || | |||||||||||||||||||| |||| Sbjct 2214 GTCATCATCGCCGGACTGGCCAGCGGCAGCACCACCTTCCACAGCGTCTCGGCCTGGGTC 2273 Query 243 GCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTTCG 302 ||||||| ||||| ||||| ||||| | | | |||||||| ||||||| ||||||||| Sbjct 2274 GCGCCCAGTGCCAGGGAGCCTTCGCGGATGCTGCGCGGAATGCGCGCCAGGCCTTCTTCG 2333 Query 303 GTGGCCACGATCACCACCGG 322 ||||| |||||||||||||| Sbjct 2334 GTGGCGACGATCACCACCGG 2353 >seq33962 Length=2546 Score = 158 bits (174), Expect = 3e-36 Identities = 186/251 (74%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 147 TCACCGGCAGCGCGGGCCACGGCGAGGATCATGCCGGTCGTCATGGCCGGGCTTGCCATG 206 || || || || || |||||||| || |||| ||||| ||||||||| ||||| Sbjct 2460 TCGCCTGCGGCACGTGCCACGGCCAGAATCAGTCCGGTTAACATGGCCGGAACGGCCATA 2401 Query 207 GGCAAGACGATCTTCCACAGCGTCTCGGCCTTGGTCGCGCCCAAGGCCAGCGAGCCCTCG 266 ||||| || | ||||| ||||| ||||||| |||||| |||| ||||||||||||| Sbjct 2400 GGCAATACCACGTTCCAGAGCGTTTCGGCCTGGGTCGCCCCCAGCGCCAGCGAGCCCTGC 2341 Query 267 CGCACGGTACGCGGAATACGCGCCAAACCTTCTTCGGTGGCCACGATCACCACCGGAACA 326 || | | | ||||| || | | |||||||| || || || ||||||||||| | Sbjct 2340 CGAAGGCTGTCGGGAATGCGGGAAAGCCCTTCTTCCGTCGCGACAATCACCACCGGCAAG 2281 Query 327 GCCAGCAGTGCCAGGGTCAACGATGCCCACAGCAGGTCCGGGGTACCCAAGGTCGGCGCC 386 | |||||| ||||| |||| ||| |||||||||| | || ||||| || ||||| || Sbjct 2280 GTCAGCAGGGCCAGTGTCAGCGACGCCCACAGCAAACCGGGCGTACCAAATGTCGGGGCA 2221 Query 387 GGCA--GTGCT 395 |||| ||||| Sbjct 2220 GGCAAGGTGCT 2210 >seq30776 Length=255 Score = 84.2 bits (92), Expect = 5e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 306 GCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCAGGTCC 365 || |||||||||||||| | || || | |||||||||| ||| ||||||||||| || Sbjct 1 GCGACGATCACCACCGGCATGGCGAGGATCGCCAGGGTCAGCGAAGCCCACAGCAGCCCC 60 Query 366 GGGGTACCCAAGGTCGGCGCCGGCAG 391 ||||| || |||||||||| ||||| Sbjct 61 GGGGTGCCAAAGGTCGGCGTGGGCAG 86 >seq23505 Length=258 Score = 84.2 bits (92), Expect = 5e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 306 GCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCAGGTCC 365 || |||||||||||||| | || || | |||||||||| ||| ||||||||||| || Sbjct 258 GCGACGATCACCACCGGCATGGCGAGGATCGCCAGGGTCAGCGAAGCCCACAGCAGCCCC 199 Query 366 GGGGTACCCAAGGTCGGCGCCGGCAG 391 ||||| || |||||||||| ||||| Sbjct 198 GGGGTGCCAAAGGTCGGCGTGGGCAG 173 >seq74004 Length=776 Score = 78.8 bits (86), Expect = 2e-12 Identities = 84/111 (76%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 298 CTTCGGTGGCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACA 357 |||||||||| |||||||| ||||| | | |||||| ||||| |||| || ||||||| Sbjct 776 CTTCGGTGGCGACGATCACTACCGGCAGCGTCAGCAGCGCCAGCGTCAGCGCCGCCCACA 717 Query 358 GCAGGTCCGGGGTACCCAAGGTCGGCGCCGGCAGTGCTTCGGGGAAGACCA 408 ||||| | || || || ||||| || ||||| | | || ||||| || Sbjct 716 GCAGGCCAGGCGTGCCGAAGGTAGGATTGGGCAGCGATCGGGAGAAGAACA 666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239982195200