Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq43058 165 7e-39 seq9272 131 1e-28 seq55660 118 9e-25 seq28198 80.6 2e-13 seq43559 75.2 9e-12 >seq43058 Length=848 Score = 165 bits (182), Expect = 7e-39 Identities = 134/161 (83%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||| ||||| |||||||| ||| || | ||||| | ||||||||| ||||||| Sbjct 640 TCGAGTCGCAGAGAACAATCCGAACTGAGACA-ACTTTTGGAGATTAGCTCACCCTCGCA 698 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || |||| ||||| | |||||||| ||||||| ||||| || | ||||||||| Sbjct 699 GGTTTGCAGCCCACTGTAGTTGCCATTGTAGCACGTGTGTAGCCCAACGCGTAAGGGCCA 758 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||||||||||||||||||||| || |||| Sbjct 759 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGCTTATCAC 799 >seq9272 Length=831 Score = 131 bits (144), Expect = 1e-28 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||| ||||||| ||||| |||| || Sbjct 212 TCGAGTTGCAGACCCCGATCCGAACTGAGACCAGCTTTTTGGGATTCGCTCCACCTCACG 271 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||| | | ||||||||| | |||||||| || Sbjct 272 GTATCGCAGCCCTCTGTACTGGCCATTGTAGCATGCGTGAAGCCCAAGACATAAGGGGCA 331 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||| || ||||||||||||||||||||||||| Sbjct 332 TGATGATTTGACGTCATCCCCACCTTCCTCCG 363 >seq55660 Length=463 Score = 118 bits (130), Expect = 9e-25 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| ||| |||| ||||| ||||| |||||||| Sbjct 145 CGAGTTGCAGCCTGCAATCCGAACTGAGATCGGCTTTTAAGGATTGGCTCCACCTCGCGG 86 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 || || ||| |||| ||||||||| ||||||| ||||| |||||||| ||| Sbjct 85 CTTTGCTTCCCGTTGTACCGACCATTGTAGTACGTGTGTAGCCCAGGTCATAAGGGGCAT 26 Query 122 GAGGACTTGACGTCATCCCCACCTT 146 || || ||||||||||||||||||| Sbjct 25 GATGATTTGACGTCATCCCCACCTT 1 >seq28198 Length=1139 Score = 80.6 bits (88), Expect = 2e-13 Identities = 79/100 (79%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATAC-ACTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| |||||||| ||| || || ||||| | ||||||||| ||||||| Sbjct 98 TCGAGTTGCAGAGAACAATCCGAACT--GAGACGACTTTTGGAGATTAGCTCACCCTCGC 41 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTG 99 ||| | || |||| ||||| |||||||| ||||||| Sbjct 40 GGGATTGCAGCCCACTGTAGTCGCCATTGTAGCACGTGTG 1 >seq43559 Length=532 Score = 75.2 bits (82), Expect = 9e-12 Identities = 92/121 (76%), Gaps = 5/121 (4%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATAC-ACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||| | ||||| | ||| || || ||||| ||||| |||| ||||||| Sbjct 118 CGAGTTGCAGAGTGCAATCTGAACT--GAGACGGCTTTC-GGGATCGGCTCGGCCTCGCG 62 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTA-CCCATAAGGGCC 119 |||| |||||||| |||||||| ||||||| ||||| | |||||||||||| Sbjct 61 ACCTGGCTCCCCTCTGTCACCGCCATTGTAGCACGTGTGTAGCCCCAGCCCATAAGGGCC 2 Query 120 A 120 | Sbjct 1 A 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415474891000