Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq20260 93.3 3e-17 seq14834 71.6 1e-10 >seq20260 Length=1540 Score = 93.3 bits (102), Expect = 3e-17 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 14 TTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGC 73 |||||||||||||||||||| || | |||||||||||||| ||||| |||||| | |||| Sbjct 1455 TTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTGC 1514 Query 74 TCTAGTTGTTGCTCTCGCAATCAAGC 99 || | ||| ||||||| |||||| Sbjct 1515 TCGACGTGTCTGTCTCGCAGTCAAGC 1540 >seq14834 Length=342 Score = 71.6 bits (78), Expect = 1e-10 Identities = 81/109 (74%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 202 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 143 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGC 109 |||||| |||||| | || |||| || |||||| | ||| ||| Sbjct 142 CTTTCGTCCCTGCTCGACACGTCCGTCTCACAGTCAAGCTCCCTTGTGC 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351570010000