Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001951.1 Length=416 Score E Sequences producing significant alignments: (Bits) Value seq22971 226 7e-57 >seq22971 Length=2564 Score = 226 bits (250), Expect = 7e-57 Identities = 301/414 (73%), Gaps = 3/414 (1%) Strand=Plus/Minus Query 3 CATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCGAC-AC 61 || ||||| |||||||||| | | ||||||| | |||||| || ||| | | || Sbjct 980 CACCCCAATGCCATGACCCTGACCGCCTTTGGCGCTACTGGCGAGGTGG-CCGAGGCGAC 922 Query 62 CTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGGC 121 ||| || || | ||||| || ||||||||||| | ||||||||| ||||| ||| Sbjct 921 CTACTATTCCATCGGTGGTGGCTTCGTGGTGGACGCCGCCCAGGCCGCCAGCGGCGTGCT 862 Query 122 GGACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCAGCT 181 ||||| ||| ||||| |||||||| || || ||||| | || |||| || ||||||| Sbjct 861 GGACAACGACACCACCGAACTGCCCTACGACTTCTCCAGCGGCGCGGAG-TGCTGCAGCT 803 Query 182 GTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTGGCG 241 ||| || |||| |||| ||||| ||||||||||| || ||||| | |||||| Sbjct 802 GTGTCGCCGTCATGGCCTGGGCGTGGCCGAGCTGATGCTGGCCAACGAAAAGAGCTGGCG 743 Query 242 CAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTGCGT 301 | ||| ||||| ||||||||||||||| || ||||| ||| |||| || ||||| Sbjct 742 CTCCGAGGAAGAGATCCGCAGCGGCCTGCTGCGCATCTGGAGCGTGATGCGCGAATGCGT 683 Query 302 GGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCGCGC 361 | || | || ||| |||| || ||||||||||||||| | || ||||| || ||||| Sbjct 682 GCAGAACGGTCTCGCCAACGAGGGCATCCTGCCCGGCGGCCTCAAGGTGCGTCGCCGCGC 623 Query 362 TGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTC 415 ||| | |||| || |||||| | ||||||||| || |||||||| Sbjct 622 CGCCCGCCTGCACCAGAGTCTGCAGGCCATCGGCAAGCCCAACGTCATCGGCTC 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1227198873600