Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq14835 298 9e-79 seq14834 98.7 2e-18 >seq14835 Length=971 Score = 298 bits (330), Expect = 9e-79 Identities = 232/275 (84%), Gaps = 1/275 (0%) Strand=Plus/Minus Query 1 CGAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCA 60 ||||| |||||| |||||||||| |||||| ||||||| ||| || ||||| ||| Sbjct 333 CGAGGGAGGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCGTACATAGCTACCCT 274 Query 61 GCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 ||| || |||||| || || ||| |||||||||| || || ||||||||||||||| Sbjct 273 GCTGCGCCGTTGGCACGACGACAGGTACACCAGAGGTACGTTCAACCCGGTCCTCTCGTA 214 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| || || ||||||||||||||| ||||||||| | |||||||||| |||||||||| Sbjct 213 CTAGGGTCAACTCCTCTCAAATTTCG-ACGCCCACGGCAGATAGGGACCAAACTGTCTCG 155 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||||| Sbjct 154 CGACGTTCTGAACCCAGCTCACGTACCACTTTAATTGGCGAACAGCCAAACCCTTGGGAC 95 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || ||||||||||||| || |||||||||||| Sbjct 94 CTGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 60 >seq14834 Length=342 Score = 98.7 bits (108), Expect = 2e-18 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 |||| ||| || ||||||||||||||||||||||||||||| || |||| |||||||||| Sbjct 342 GCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGG 283 Query 257 ATGAGACGAGCCGACATCG 275 | || |||||||||||| Sbjct 282 TGGCGAAGAGCCGACATCG 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779814410800