Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01001999.1 Length=541 Score E Sequences producing significant alignments: (Bits) Value seq3366 78.8 3e-12 >seq3366 Length=12665 Score = 78.8 bits (86), Expect = 3e-12 Identities = 171/252 (68%), Gaps = 17/252 (7%) Strand=Plus/Minus Query 283 GCCAGTTCCTGCCACAGGGCGATGGTCTCGTCATC-CGCCTGCTTGGGCATTACTGCCTT 341 ||||||| ||||||| || ||| || ||||| | |||| || ||| || |||| Sbjct 12045 GCCAGTTGGCGCCACAGCGCCTGGGTTTCTTCATCGCCCCTGGGCGG-CATCACCACCTT 11987 Query 342 GAGCTGGATGTACAGGAAACCTCGCTCCCCAGCCTTGTTCAGCAAGCCATGGCCCTTGGC 401 |||| || | ||| | | | || ||| | |||| | |||| |||||||| | Sbjct 11986 GAGCAGGGCATGCAG---ATCGCCCTGCCCCGTCTTG-----CCGGCCA-GGCCCTTGCC 11936 Query 402 GCGCATGCGCTGGC------CGTTCTGGCTGCCGGCCGGCACCTTGAGGTTGATCTTGCC 455 ||||| ||| | | ||||||||||||||| ||| | |||| |||||| || Sbjct 11935 GCGCACCCGCAGCCGCGCACCGTTCTGGCTGCCGGGCGGGATACTGAGCATGATCTGTCC 11876 Query 456 GGTCAGGGTCGGCACGGCCACTTCGGCGCCCAGCGCCAGTTCCCACGGTGCCAGTGGCAA 515 ||| |||||||| ||| | |||||||| ||| |||||| || || || || | Sbjct 11875 ATCCAGCGTCGGCACCTGCACCTTGGCGCCCAACGCAGCTTCCCAGGGGGCGAGCGGTAC 11816 Query 516 GGTGATCACCAG 527 | ||| |||||| Sbjct 11815 GCTGACCACCAG 11804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1626677673600