Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq39293 309 5e-82 seq416 307 2e-81 seq39292 244 2e-62 seq52717 145 1e-32 seq36942 105 1e-20 >seq39293 Length=372 Score = 309 bits (342), Expect = 5e-82 Identities = 231/268 (86%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60 || || ||||| || ||||||||||| ||||||||||| ||||||| || ||||| || Sbjct 266 TATGCGTTGCGACCACTGGATTTCGCCGTGTTCCCGACC-ATTCTGCTGGCCGCGACGCT 208 Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120 ||| || |||||| | ||||| || || ||||| |||||| |||| |||||||| || || Sbjct 207 GCTGCGCCTGGCACTCAACGTGGCGTCGACGCGCGTGGTGCTGCTGCACGGCCACGAGGG 148 Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180 ||| | ||| || || ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 147 CCACGGCGCGGCGGGGCAGGTGATCCAGGCCT-CGGTGAGGTGGTGATCGGCGGTAACTA 89 Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240 |||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| Sbjct 88 CGTGGTCGGTATCGTGGTGTTCGCCATCCTCATGATCATCAACTTCGTGGTGGTCACCAA 29 Query 241 GGGCGCCGGGCGGATTTCCGAGGTGAGC 268 ||| ||||| ||||||||||| |||||| Sbjct 28 GGGTGCCGGACGGATTTCCGAAGTGAGC 1 >seq416 Length=5953 Score = 307 bits (340), Expect = 2e-81 Identities = 238/282 (84%), Gaps = 1/282 (0%) Strand=Plus/Minus Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60 |||||| |||||||||||||||||||||| |||||||| || |||| |||| ||||||| Sbjct 2221 TACGCCCTGCGGCCGCTGGATTTCGCGGTCTTCCCGACC-ATCCTGCTGGTGTCGACCCT 2163 Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120 ||| || ||||| ||||||| ||||| | || |||||| || | |||||||||||||| Sbjct 2162 GCTGCGCCTGGCGCTGAACGTGGCCTCGAGCCGCGTGGTGCTGTTGCACGGCCAGGACGG 2103 Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180 || | ||| || || ||||| |||||||||||||| ||||||||| ||||||| ||||| Sbjct 2102 TCACGACGCCGCGGGCAAGGTCATCCAGGCCTTCGGCGAGGTGGTGGTCGGCGGCAACTA 2043 Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240 |||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct 2042 CGTGGTCGGTGCGGTGGTGTTCGCCATCCTCATGATCATCAACTTCGTGGTGGTGACCAA 1983 Query 241 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 ||| ||||| || || ||||||||| ||||| || ||||| Sbjct 1982 GGGTGCCGGCCGCATCTCCGAGGTGTCGGCGCGTTTCACCCT 1941 >seq39292 Length=203 Score = 244 bits (270), Expect = 2e-62 Identities = 156/170 (92%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 115 GGACGGCCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGG 174 |||||| || | ||| || || |||||||||||||||||||||||||||||||||||||| Sbjct 203 GGACGGTCACGACGCCGCGGGCAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGG 144 Query 175 TAACTACGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGT 234 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 143 CAACTACGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTCGTGGTGGT 84 Query 235 GACCAAGGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 |||||||| ||||| ||||||||||| ||||||||||| || ||||||| Sbjct 83 CACCAAGGGTGCCGGACGGATTTCCGAAGTGAGCGCGCGCTTCACCCTCG 34 >seq52717 Length=448 Score = 145 bits (160), Expect = 1e-32 Identities = 100/113 (88%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 172 CGGTAACTACGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGT 231 ||| ||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| Sbjct 448 CGGCAACTACGTGGTCGGTGCGGTGGTGTTCGCCATCCTCATGATCATCAACTTCGTGGT 389 Query 232 GGTGACCAAGGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||| |||||||| ||||| ||||||||||| ||||||||||| || ||||||| Sbjct 388 GGTCACCAAGGGTGCCGGACGGATTTCCGAAGTGAGCGCGCGCTTCACCCTCG 336 >seq36942 Length=1647 Score = 105 bits (116), Expect = 1e-20 Identities = 186/267 (70%), Gaps = 7/267 (3%) Strand=Plus/Minus Query 14 CGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGGCA 73 ||||||| || |||| || || || ||||||| | | | |||||||| || ||| | Sbjct 1088 CGCTGGAGTTTGCGGCCTTTCCCACC-ATTCTGCTGTTTTCCACCCTGCTGCGCCTGTCG 1030 Query 74 TTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTGC- 132 ||||||| ||||| ||||| | | |||| | || || ||| |||||| || Sbjct 1029 CTGAACGTAGCCTCTACGCGTATTATTTTGCTGGAAGGGCATACCGG---TGCCGCGGCG 973 Query 133 -CGGTAAGG-TGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGT 190 ||| | || || | | ||||| || | | || | ||||| |||| || |||| Sbjct 972 GCGGGACGGGTGGTGGAAGCCTTTGGCCACTTCCTGGTTGGCGGAAACTTCGCCATCGGG 913 Query 191 ATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGG 250 ||||||||||| |||||| |||||||||||||| |||| | ||||| || || || Sbjct 912 ATCGTGGTGTTTATCATCCTGGTGATCATCAACTTTATGGTTATCACCAAAGGTGCGGGC 853 Query 251 CGGATTTCCGAGGTGAGCGCGCGGTTT 277 || || |||| ||| | ||||| ||| Sbjct 852 CGTATCGCCGAAGTGGGTGCGCGCTTT 826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 808578057100