Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq4364 141 3e-31 seq32070 123 9e-26 seq35355 96.9 1e-17 >seq4364 Length=3847 Score = 141 bits (156), Expect = 3e-31 Identities = 269/392 (69%), Gaps = 8/392 (2%) Strand=Plus/Plus Query 15 GTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCACCGGTCTAGT 74 |||| |||||||||| ||| ||||| || |||| | ||||||||| | |||| || || Sbjct 3364 GTTCTGGTCGTTCCGCATCATGGTCGCCCTGGGCATGCTGATGATCGCCGCCGGCCT-GT 3422 Query 75 TCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGTTCCTG---TAC 131 ||| ||||| |||| || ||| |||| ||| | | || | |||||| | | Sbjct 3423 GGAGCGCCTGGCT-GCGCTGGCGCGGCAAGCTGTTCGAGACCCGCGCCTTCCTGAGATTC 3481 Query 132 CTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACG 191 ||| | || | || || ||| ||||||| | || ||||||||||||||||| Sbjct 3482 ATGG---TCTGCACCGGTCCCATCGGCCTGATCGCCCTGCTGGCCGGCTGGTTCACCACC 3538 Query 192 GAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATGCGTCCTCC 251 || | ||||| ||||||||| | |||||||||||| ||||||| ||| | | ||| Sbjct 3539 GAGGTGGGCCGCCAGCCGTGGATCGTCTACGGCCTGCTGCGCACCAAGGACGGGGTGTCC 3598 Query 252 GGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCG 311 || ||| | ||| ||| || || |||||| ||||||||||| |||||||| Sbjct 3599 AATCACAGCGTCACCCAGCTGAGCATCACCCTGGTGGCCTTCGTGGTGGTCTACTTCGCC 3658 Query 312 CTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGCAGACCCAC 371 ||||||| ||| |||| ||||| || | |||| || ||||| || Sbjct 3659 GTGTTCGGCATCGGCACCCTCTACGCCCTGCGCATGATCGGCAAGGGCCCGCATGCCGGT 3718 Query 372 GAAGGCGATGAGCCGACCCACGGTGGTCCTGG 403 |||||||| ||| || ||| ||||| || Sbjct 3719 GAAGGCGACCTGCCCACTTCCGGCGGTCCGGG 3750 >seq32070 Length=708 Score = 123 bits (136), Expect = 9e-26 Identities = 215/313 (69%), Gaps = 21/313 (7%) Strand=Plus/Minus Query 276 ATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCGCTGTTCGGTGCCGGTCTGGGCTAC 335 || || |||||| ||||||||||| || ||||| ||||||| ||| ||| Sbjct 683 ATCACCCTGGTGGCCTTCGTGGTGGTCTATTTCGCCGTGTTCGGCATCGGCACCCTCTAT 624 Query 336 ATGATGCGCCTGGTGCGCAAAGGTCCGCAGACCCACGAAGGCGATGAGCCGACCCACGGT 395 | ||||| || | |||| |||||||| ||| |||||||| ||| ||| ||| Sbjct 623 GCGCTGCGCATGATCGGCAAGGGTCCGCACACCGGTGAAGGCGACCTGCCCACCTCCGGC 564 Query 396 GGTCCTGGCCAGAAACGCACGCCAGCCC----GTCCGTTGTCTGCCGCCGATGATGGCAG 451 ||||| ||| | || ||||| ||| ||||| |||| | |||||||| ||| Sbjct 563 GGTCCGGGC----ACCGATCGCCATCCCAAGCGTCCGCTGTCCGGCGCCGATGGCGGCCT 508 Query 452 CGATGACGACCACACCCACATCCAGCACAAGGGGCATTG-AGATG------------GGT 498 || || ||| || || | ||||| | || | | | ||| || Sbjct 507 GGAAGAAGACAACCCCACCGACCAGCTGACCGGAGACCGCACATGAACGGCATCCCTGGC 448 Query 499 ATTGATCTTCCGCTGATCCGGGCCGTGATCATCATCTTCGGCATCATGATGTACGTGGTC 558 || || || ||||||||| |||| | ||||||||||||||| ||||||||||||||||| Sbjct 447 ATCGACCTCCCGCTGATCTGGGCGATCATCATCATCTTCGGCCTCATGATGTACGTGGTC 388 Query 559 ATGGACGGCTTCG 571 ||||||||||||| Sbjct 387 ATGGACGGCTTCG 375 >seq35355 Length=3136 Score = 96.9 bits (106), Expect = 1e-17 Identities = 216/322 (67%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 120 CCGTTCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGC 179 |||||||||| | || ||| ||||| || ||||| ||||||||||| | || ||| Sbjct 1739 CCGTTCCTGTGGTTTGCTTTGCTCATGGGACCCTCCGGCCTGATCGCGATTTTAGCAGGC 1680 Query 180 TGGTTCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCG 239 ||||| || || |||||||| |||||||| ||||| || || ||| | ||| ||| Sbjct 1679 TGGTTTACTACCGAAATCGGTCGTCAGCCCTGGGTAGTTTATGGCGTTCAGCGGACGATT 1620 Query 240 GATGCGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTG 299 |||||| || ||| || |||| |||| || | ||| | || | || Sbjct 1619 GATGCGGTATCTCCCCATGGCGAAATGCACATGAGTATCAGCCTGCTCGCCTTTATTCTG 1560 Query 300 GTGTACTTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGT 359 || |||| | | | ||||||| ||| ||| ||||||||| || | ||||| Sbjct 1559 GTTTACTCCTCCGTCTTCGGTGTGGGTTATCACTATATGATGCGCTTGATTAAAAAAGGG 1500 Query 360 CCGCAGACCCACGAAGGCGAT-GAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCC 418 ||| ||| |||||||||| | || || ||||| || || || | ||||| Sbjct 1499 CCGGTCACCGGCGAAGGCGATACCGTGGAAACA-GGTGGCCCCGGACAAATCAAAACGCC 1441 Query 419 AGCCCGTCCGTTGTCTGCCGCC 440 ||| || ||| | ||||| ||| Sbjct 1440 AGCGCGCCCGCTCTCTGCGGCC 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1722552585600