Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq6220 244 2e-62 seq46055 145 1e-32 seq50184 109 9e-22 seq51225 104 4e-20 seq39375 104 4e-20 seq1704 102 1e-19 seq68340 98.7 2e-18 seq51692 75.2 2e-11 seq97824 73.4 7e-11 seq60339 73.4 7e-11 >seq6220 Length=10105 Score = 244 bits (270), Expect = 2e-62 Identities = 226/285 (79%), Gaps = 1/285 (0%) Strand=Plus/Minus Query 10 GCCAGGAGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTTAGCGACATA 69 |||||| || |||||||| || |||| ||||||||||| ||||| || ||||| Sbjct 6105 GCCAGGGCGCCGCAGACGGCGACCGCGAGAACCAGCAACAGAGGGAAGTTCCAGGACATG 6046 Query 70 GGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTG 129 || | ||||||| | ||||||| || |||||||| |||| | ||||| || ||| | Sbjct 6045 GGCTTCAGCTATCCACCTTGAGCACGGCCAGGAAGGCCTCTT-GAGGAATCTCTACGCTA 5987 Query 130 CCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGG 189 || || |||||||||| || || || ||||| ||||| || |||||||||||||||||| Sbjct 5986 CCAACCTGCTTCATGCGCTTCTTGCCCGCCTTCTGCTTTTCCAGCAGCTTGCGCTTACGG 5927 Query 190 CTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTC 249 ||||||||||||||||| |||||||| |||||||| | || |||||||| | |||| Sbjct 5926 GACACGTCACCGCCGTAGCACTTGGCCAGAACGTTCTTGCGCAGCGCCTTGACCGTGGTC 5867 Query 250 CGCGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 || || | |||||| ||||| ||||| ||||||||||| |||||| Sbjct 5866 CGGGCCACGATCTGACCGCCGATGGCCGCCTGGATCGCCACGTCG 5822 >seq46055 Length=1816 Score = 145 bits (160), Expect = 1e-32 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 ||||| || ||||||||||| | | || ||||||||| ||| || |||||||||| || Sbjct 247 AGCACAGCCAGGAAGGCTTCCT-GCGGGATTTCCACGCGGCCGACCTGCTTCATGCGCTT 189 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 || || | || ||||| || | |||||| ||| || ||||| || || ||||| Sbjct 188 CTTGCCTTCTTTCTGCTTTTCCAACAGCTTCTTCTTGCGCGAGACGTCGCCACCATAGCA 129 Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCC 269 |||||||| |||||||| | | |||||||| | ||| || || ||||||||| ||| Sbjct 128 CTTGGCCAGCACGTTCTTGCGCATCGCCTTGACCGTGGTGCGGGCGATGATCTGCGAGCC 69 Query 270 AATGGCGGCCTGGATCGCGACGTCG 294 || |||||||||||||| |||||| Sbjct 68 GATCGCGGCCTGGATCGCCACGTCG 44 >seq50184 Length=730 Score = 109 bits (120), Expect = 9e-22 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 80 ATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCT 139 ||||| | ||||| | || | |||||| || | || || || || ||||| | || Sbjct 616 ATCCATCTTGAGCGCGGCGATGAAGGCG-CTCTGCGGGATCTCGACCTTGCCGAACTGCC 558 Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 |||||| || || || |||| ||||| || || ||||| ||||| ||||| | ||| | Sbjct 557 GCATGCGCTTCTTGCCCTCCTTCTGCTTGTCGAGGAGCTTCCGCTTGCGGCTGATGTCGC 498 Query 200 CGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGA 259 |||| ||||| |||||| |||| ||| | || ||| |||| | || || |||| Sbjct 497 CGCCATAGCACTTGGCCGTCACGTCCTTGCGCAGCGCCCTGACCGTTTCGCGGGCGATGA 438 Query 260 TCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 || ||||| |||||||||||||||| || Sbjct 437 CCTTGCCGCCGATGGCGGCCTGGATCGGGA 408 >seq51225 Length=1290 Score = 104 bits (114), Expect = 4e-20 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| ||||| || | |||||| ||| || ||||| || || ||||| ||||||| Sbjct 1281 CCTTCTGCTTTTCCAACAGCTTCTTCTTGCGCGAGACGTCGCCACCATAGCACTTGGCCA 1222 Query 218 GTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGG 277 | |||||||| | | |||||||| | ||| || || ||||||||| ||| || |||| Sbjct 1221 GCACGTTCTTGCGCATCGCCTTGACCGTGGTGCGGGCGATGATCTGCGAGCCGATCGCGG 1162 Query 278 CCTGGATCGCGACGTCG 294 |||||||||| |||||| Sbjct 1161 CCTGGATCGCCACGTCG 1145 >seq39375 Length=1338 Score = 104 bits (114), Expect = 4e-20 Identities = 139/192 (72%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || ||||| ||||| | | || | ||| ||||| || || ||||||| || || ||||| Sbjct 1112 GCGAGGAATGCTTCCT-GCGGCAGTTCAACGTTACCGACCTGCTTCATTCGCTTCTTACC 1170 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | || ||||||| | |||||| |||||| || |||||||||||||| || ||||| Sbjct 1171 CTCTTTCTGCTTCTGCAACAGCTTTTTCTTACGACTGACGTCACCGCCGTAACACTTGGC 1230 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 || |||||||| | || ||||||| | || || || || || ||| || || Sbjct 1231 AAGGACGTTCTTACGCAGCTGTTTGACGGTTGAGCGAGCGATAATGTGGTTGCCGATTGC 1290 Query 276 GGCCTGGATCGC 287 ||||| ||||| Sbjct 1291 CGCCTGAATCGC 1302 >seq1704 Length=440 Score = 102 bits (112), Expect = 1e-19 Identities = 145/199 (73%), Gaps = 10/199 (5%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 ||| |||| | ||| || |||| | || | || ||| ||||| ||||||||| || Sbjct 200 AGCGCCGCGATGAACGCCTCTT-GCGGCACCTCGACGCGACCCACCATCTTCATGCGCTT 258 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 || || | || |||||||| |||||||||||||| ||| | | ||||||||||||||| Sbjct 259 CTTGCCCTCTTTCTGCTTCTCGAGCAGCTTGCGCTTGCGGGTGATGTCACCGCCGTAGCA 318 Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGA-GGTC---CGCGCAATGATCTGCC 265 ||||| || |||| || | || || |||| |||| ||||| ||||| | Sbjct 319 CTTGGCGAGCACGTCTTTGCGGATCGC----GCGGATGGTCTCGCGCGCGATGATGCGGG 374 Query 266 CGCCAATGGCGGCCTGGAT 284 || | |||||||||||||| Sbjct 375 CG-CGATGGCGGCCTGGAT 392 >seq68340 Length=802 Score = 98.7 bits (108), Expect = 2e-18 Identities = 99/126 (79%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 102 AAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTT 161 || ||||| | | |||| || ||||| || || ||||||| || |||||||| | || Sbjct 328 AATGCTTCCT-GCGGAACCTCAACGTTACCAACCTGCTTCATACGCTTTTTACCTTCTTT 386 Query 162 TTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTAC 221 ||||||||| |||||||| ||||||||| | |||||||||||| || ||||| || || Sbjct 387 TTGCTTCTCCAGCAGCTTACGCTTACGGGAGATGTCACCGCCGTAACA-TTGGCAAGGAC 445 Query 222 GTTCTT 227 ||| || Sbjct 446 GTTTTT 451 >seq51692 Length=303 Score = 75.2 bits (82), Expect = 2e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 115 GGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGC 174 || ||||||||| |||| || ||||||| || || || || |||| ||||| || || Sbjct 99 GGGATTTCCACGCTGCCAACCTGCTTCATCCGCTTCTTGCCCTCCTTCTGCTTGTCGAGG 40 Query 175 AGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTG 213 ||||||||||| || |||| ||||||||||| ||| Sbjct 39 AGCTTGCGCTTGCGCGACGCGTCGCCGCCGTAGCACTTG 1 >seq97824 Length=866 Score = 73.4 bits (80), Expect = 7e-11 Identities = 95/130 (73%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 160 TTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGT 219 || ||||| || ||||||||||||||||| | |||| ||||| ||||| ||||| Sbjct 5 TTCTGCTTGTCCAGCAGCTTGCGCTTACGAGTAGCGTCGCCGCCATAGCACTTGGCGGTC 64 Query 220 ACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCC 279 |||| ||| | || || |||| |||||||| | || ||||| ||||||||| Sbjct 65 ACGTCCTTGCGCAGCGCGCGCACGGTTTCACGCGCAATCACCT-TCCGCCGATGGCGGCC 123 Query 280 TGGATCGCGA 289 || |||| || Sbjct 124 TGAATCGGGA 133 >seq60339 Length=651 Score = 73.4 bits (80), Expect = 7e-11 Identities = 101/139 (73%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 151 TTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCAT 210 || || ||||| ||||| || ||||||||||||||||| | |||| ||||||||||| Sbjct 2 TTGCCCGCCTTCTGCTT-TCCAGCAGCTTGCGCTTACGCGTCGCGTCCCCGCCGTAGCA- 59 Query 211 TTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCA 270 |||||| |||| ||| | | || ||| | ||||| || | || ||||| Sbjct 60 TTGGCCGTCACGTCCTTGCGCATCGCGCTGATCGTCTCGCGCGCGATCACCTTGCCGCCG 119 Query 271 ATGGCGGCCTGGATCGCGA 289 || || |||||||||| || Sbjct 120 ATCGCCGCCTGGATCGGGA 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840537664100